| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1012 |
|---|
| Symbol | |
|---|
| ID | 4693493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1125048 |
|---|
| End bp | 1125596 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639848790 |
|---|
| Product | OmpA domain-containing protein |
|---|
| Protein accession | YP_995807 |
|---|
| Protein GI | 121608000 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC GCATAAGCCT TGCCCTGACC ATTGCCGCCT TGGTGGCCGG TTGTAGCTCT
GGCGTAAAAC TCGACGAAGT ACCCATCGAA GACAAAACCG CAAGCACGCT CAGCGGTGAA
GCCAACGCCG GCGGCAACAC CGGCAACGCC GCCCAGGGCA GTGGCGGCGT TGCCGGCGTC
GACTTGACGC AACCGGCGCG GGATACCGCA GGCCCCGTGG GCATCGCCCG CATCGTCTAC
TTCGACTACG ACAGCTACGT CATCAAACCC GAGTTCCAGA CGCTGATCGA AGCCCACTCC
CGTTTCATCA AAACCGACAC CAAGCGCAAA CTGATGCTCG AAGGGCACAC CGACGAGCGT
GGCGGCCGTG AATACAACCT GTCCCTGGGA CAAAAGCGGG CCGAAGCCGT GCGCCGCGCA
CTGGGCCTGC TGGGCGTGCC GGACAGCCAG ATGGAAGCCG TGAGCTTCGG CAAGGAAAAA
CTGGCAGTGC AAGGCCACAC CGAAGAGGCG CACGCGCAAA ACCGCCGAGT CGAAATGACC
TACCGATGA
|
|---|
| Protein sequence | MIKRISLALT IAALVAGCSS GVKLDEVPIE DKTASTLSGE ANAGGNTGNA AQGSGGVAGV
DLTQPARDTA GPVGIARIVY FDYDSYVIKP EFQTLIEAHS RFIKTDTKRK LMLEGHTDER
GGREYNLSLG QKRAEAVRRA LGLLGVPDSQ MEAVSFGKEK LAVQGHTEEA HAQNRRVEMT
YR
|
|---|
| |