| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1010 |
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| Symbol | |
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| ID | 4693443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1121629 |
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| End bp | 1123518 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639848788 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_995805 |
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| Protein GI | 121607998 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCA CAGATACGGG CGCCACGCCT GCCGACACCC CGCTTTTGCC TCGTCGCTTG
ACGGCGCGTC TGATGCGGTT GTCGGTTTAC TTTGGCCGGC AGCGGCTGGC CTGGGGGCTG
GCCATCGCCG CAACGCTGGT GGGCGCGCTC ACGGAGCCGT TGATTCCGGC CCTGCTGCAG
CCCTTGCTCG ACGAGGGCTT CATCCAGGGC CGCTTGCCGC TGTGGCTGGT GCCGCTGGCC
ATTTTGGGGG TGTTCCTGGT CCGGGGCTTG GCCCAGTTCG TGGGCCAGTA TGCGCTGGCG
CGGATTGCCA ATGACGGCAT GCTGACCCTG CGCCAGGCCC TGTTCGACCG GGTGCTGGCC
GCCGAAATGG GCTTGTTTGC GCGCCAGTCC GCCAGTGCCC TGGCCAACAC CGTGGTCTAC
GAAGTGCAGA CCGGCGCCAC GCTGCTGGTG CAGGCGCTGC TGGGGCTGTC GCGCGATGGC
TTTACCTTGC TTGCACTGCT GGCCTATTTG CTGTATCTGA ACTGGCAGCT CACGCTGATC
GTCGCGGTGG TGGTTCCGGG GGTGGCATGG ATCATGAAGA CGCTGTCGCG GCGGCTGTAC
CGGTTGACCA AGAGCAGCCA GCAGGCCACG GACGAGTTGG CCTATGTGGT GGAAGAAAAC
GTGCTGGCGC ACCGCATCGT CCGTCTGCAC GGTGCGCAGG CCGGCCAGGC CCGGCGCTTT
GCCGGCCTGA GCCAGGGCCT GCGGCGCTTG GCGATCAAGG CGACGATTGC CTCGGCCGCG
ATGACGCCGC TGACGCAGTT GCTGGCAGCG GCCGCGCTGT CGGTGGTGAT CTGCATCGCC
CTGTGGCAAA GCCACAGCGC CGGCGATGCC GGCGATGTCA CCGTGGGCGG CTTCGTCTCG
TTCATCACGG CGATGCTGAT GCTGATCGCG CCGATCCGGC GCCTGGCCGA TGTGGCCAGC
CCGGTGACGC GCGGCGTGGC CGCGCTCGAG CGCGGCCTGG GCCTGCTGGA GGAGACCGGC
GCCGAAACCG GCGGGCCGTA TCGGGCGCAA CGCACACAAC GCACGCAGCC GGCAGGGCAG
GCGCAGCCGT CAGACCCGCC AAAGCCGCCA AAGCCACCCC CCCAGGGCGC GCTCACGCTC
GACAGCGTGA GCGTGAGCTT TGGCCCGGAG CGTGCGCCGG CCCTGGAGCG CGTGAGTTTG
CGCGTGCAGC CCGGTGAAAT CGTCGCCCTG GTCGGCCCCT CTGGCGCCGG CAAGACCACC
TTGGTGAACC TGTTGCCGCG CTTCGTGCTG CCGACATCGG GCCGGATTCT GCTGGACGGA
CAGGCTTTGC CCGACTGGGA TCTGGGTGCG CTGCGGGCGC AATTTGCGAT GGTCAGCCAG
GATGTGGTGC TGCTCAACGA CAGCATTGCC TGCAATGTGG CGCTGGGCCG GGCCGTCGAC
GAAAAGCGCG TGCACGAGTG CCTGGCTGCG GCCCATCTGA CCGAGCATGT GGCCGCGCTC
CCGCAGGGGA TTCACACGGT GGCCGGGCAC AACGCCGCGC AGCTATCGGG CGGGCAGCGC
CAGCGGCTGG CGATTGCGCG CGCGCTCTAC AAGGATGCGC CGATCCTGAT TCTGGACGAA
GCGACTTCGG CGCTCGATAC CGAGTCCGAA CGGCTGGTGC AGCAGGCCCT GCAGCGCCTG
ATGCAGGGAC GCACCACGCT GGTCATTGCG CACCGGCTGT CGACCATAGA ACATGCGGAT
CGGGTGGTGG TGATGGAGCG CGGGCGCATC GCCGAGCAAG GCACGCACAG CGAATTGATG
GCGCGCGGCG GCCTGTATGC GCGCCTGCAG GCCCGGCCCG CTGGCGGCAA TGGCCTGGCC
CGGGGTGATG CCGGGGTGAT GCCGGGGTGA
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| Protein sequence | MPATDTGATP ADTPLLPRRL TARLMRLSVY FGRQRLAWGL AIAATLVGAL TEPLIPALLQ
PLLDEGFIQG RLPLWLVPLA ILGVFLVRGL AQFVGQYALA RIANDGMLTL RQALFDRVLA
AEMGLFARQS ASALANTVVY EVQTGATLLV QALLGLSRDG FTLLALLAYL LYLNWQLTLI
VAVVVPGVAW IMKTLSRRLY RLTKSSQQAT DELAYVVEEN VLAHRIVRLH GAQAGQARRF
AGLSQGLRRL AIKATIASAA MTPLTQLLAA AALSVVICIA LWQSHSAGDA GDVTVGGFVS
FITAMLMLIA PIRRLADVAS PVTRGVAALE RGLGLLEETG AETGGPYRAQ RTQRTQPAGQ
AQPSDPPKPP KPPPQGALTL DSVSVSFGPE RAPALERVSL RVQPGEIVAL VGPSGAGKTT
LVNLLPRFVL PTSGRILLDG QALPDWDLGA LRAQFAMVSQ DVVLLNDSIA CNVALGRAVD
EKRVHECLAA AHLTEHVAAL PQGIHTVAGH NAAQLSGGQR QRLAIARALY KDAPILILDE
ATSALDTESE RLVQQALQRL MQGRTTLVIA HRLSTIEHAD RVVVMERGRI AEQGTHSELM
ARGGLYARLQ ARPAGGNGLA RGDAGVMPG
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