Gene Veis_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0998 
Symbol 
ID4693242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1110998 
End bp1112113 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content67% 
IMG OID639848776 
ProductABC transporter related 
Protein accessionYP_995793 
Protein GI121607986 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.819834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACG ATCTCGAACT GCTGAACCTG TGCAAGCGCT ATCCGGGCGG CCACCAGGCC 
GTCGACAACT TTTGCCTGCA GGCCCGACGG GGCGAGTTCA TCTCGATCGT CGGCCCGTCG
GGCTGCGGCA AGACGACGAC GCTGCGCATG TTGGCCGGAT TCGAGAGCCT GAGCAGCGGC
CGGATTTTGC TGCGCGGTCA GGACATCGGG CATTTGCCGC CCGAGCAGCG GCCGACATCG
ACGATCTTTC AGGACTTCGC GCTGTTCCCG CACATGACGG TGCGCGAGAA CATTGCGTTC
GGCCTGCAGG TGCGCAGGCT GGCTCCGGCG GCGATGAAGG CGCGCATCGA TCACATGCTC
GGGCTTTTCG AGCTCGATGC GGTGGCCGGA CGCCGCGGCA GCCAGTTGTC GGGCGGGCAG
CGCCAGCGGG TGGCGTTGGC CCGCGGCTTG GCGGTACAGC CGGACATCCT GCTGCTCGAC
GAACCCCTGG GCGCGCTCGA TGCCAACCTG CGCAAGTCGA TTCAGCATGA GCTCAAGCTG
CTGCAGCGCG AGGTCGGCAT CACCTTCTTG TTCGTCACGC ATGCGCAATC CGAAGCGCTG
GTGCTGTCCG ACCGCGTGGT GGTGATGAAT CGCGGCCGCG CCGAACAGAT CGCCACGCCC
CATACCCTGT ACACGCGCCC GGCAACGCCG TTCGTCGCGC GCTTCATCGG CCGCAACGCC
TTGCTGGCAG GCCGGGTGCA GGCGCTGGGG CACGGCGTGG CGCTGGTGGA CACGGCGCTG
GGCCTGCTCA AAGGCAGCCC TGCCGAGAAC AGCGGCCTGC GCATCGGAGA CCGCGCGCTG
CTGGTCGTGC CCTCGGAAGC GATGGATTTG AGAGCGGCGC CAGACGACGA GACCCAGGCG
CCCGAAGGGC AGATCGCCGG CCATGTCAGC GGCCGGACCT ACACCGGACA GACCGTGCGG
CTACAGGTCG AATTGGCCGA CGGCGAATGC CTGAGCATCA AGCGCCATGT CGATCACGCG
GACGATTTGC CCAACGCGGC CAGGGTGCAA GTGTCGTGGC CGATTGCCGA GGCGACGGTG
ATCCCTGCGG GCCCCGATCC GGGGTCGTGT CTGTAA
 
Protein sequence
MQHDLELLNL CKRYPGGHQA VDNFCLQARR GEFISIVGPS GCGKTTTLRM LAGFESLSSG 
RILLRGQDIG HLPPEQRPTS TIFQDFALFP HMTVRENIAF GLQVRRLAPA AMKARIDHML
GLFELDAVAG RRGSQLSGGQ RQRVALARGL AVQPDILLLD EPLGALDANL RKSIQHELKL
LQREVGITFL FVTHAQSEAL VLSDRVVVMN RGRAEQIATP HTLYTRPATP FVARFIGRNA
LLAGRVQALG HGVALVDTAL GLLKGSPAEN SGLRIGDRAL LVVPSEAMDL RAAPDDETQA
PEGQIAGHVS GRTYTGQTVR LQVELADGEC LSIKRHVDHA DDLPNAARVQ VSWPIAEATV
IPAGPDPGSC L