Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0998 |
Symbol | |
ID | 4693242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 1110998 |
End bp | 1112113 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639848776 |
Product | ABC transporter related |
Protein accession | YP_995793 |
Protein GI | 121607986 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.819834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCACG ATCTCGAACT GCTGAACCTG TGCAAGCGCT ATCCGGGCGG CCACCAGGCC GTCGACAACT TTTGCCTGCA GGCCCGACGG GGCGAGTTCA TCTCGATCGT CGGCCCGTCG GGCTGCGGCA AGACGACGAC GCTGCGCATG TTGGCCGGAT TCGAGAGCCT GAGCAGCGGC CGGATTTTGC TGCGCGGTCA GGACATCGGG CATTTGCCGC CCGAGCAGCG GCCGACATCG ACGATCTTTC AGGACTTCGC GCTGTTCCCG CACATGACGG TGCGCGAGAA CATTGCGTTC GGCCTGCAGG TGCGCAGGCT GGCTCCGGCG GCGATGAAGG CGCGCATCGA TCACATGCTC GGGCTTTTCG AGCTCGATGC GGTGGCCGGA CGCCGCGGCA GCCAGTTGTC GGGCGGGCAG CGCCAGCGGG TGGCGTTGGC CCGCGGCTTG GCGGTACAGC CGGACATCCT GCTGCTCGAC GAACCCCTGG GCGCGCTCGA TGCCAACCTG CGCAAGTCGA TTCAGCATGA GCTCAAGCTG CTGCAGCGCG AGGTCGGCAT CACCTTCTTG TTCGTCACGC ATGCGCAATC CGAAGCGCTG GTGCTGTCCG ACCGCGTGGT GGTGATGAAT CGCGGCCGCG CCGAACAGAT CGCCACGCCC CATACCCTGT ACACGCGCCC GGCAACGCCG TTCGTCGCGC GCTTCATCGG CCGCAACGCC TTGCTGGCAG GCCGGGTGCA GGCGCTGGGG CACGGCGTGG CGCTGGTGGA CACGGCGCTG GGCCTGCTCA AAGGCAGCCC TGCCGAGAAC AGCGGCCTGC GCATCGGAGA CCGCGCGCTG CTGGTCGTGC CCTCGGAAGC GATGGATTTG AGAGCGGCGC CAGACGACGA GACCCAGGCG CCCGAAGGGC AGATCGCCGG CCATGTCAGC GGCCGGACCT ACACCGGACA GACCGTGCGG CTACAGGTCG AATTGGCCGA CGGCGAATGC CTGAGCATCA AGCGCCATGT CGATCACGCG GACGATTTGC CCAACGCGGC CAGGGTGCAA GTGTCGTGGC CGATTGCCGA GGCGACGGTG ATCCCTGCGG GCCCCGATCC GGGGTCGTGT CTGTAA
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Protein sequence | MQHDLELLNL CKRYPGGHQA VDNFCLQARR GEFISIVGPS GCGKTTTLRM LAGFESLSSG RILLRGQDIG HLPPEQRPTS TIFQDFALFP HMTVRENIAF GLQVRRLAPA AMKARIDHML GLFELDAVAG RRGSQLSGGQ RQRVALARGL AVQPDILLLD EPLGALDANL RKSIQHELKL LQREVGITFL FVTHAQSEAL VLSDRVVVMN RGRAEQIATP HTLYTRPATP FVARFIGRNA LLAGRVQALG HGVALVDTAL GLLKGSPAEN SGLRIGDRAL LVVPSEAMDL RAAPDDETQA PEGQIAGHVS GRTYTGQTVR LQVELADGEC LSIKRHVDHA DDLPNAARVQ VSWPIAEATV IPAGPDPGSC L
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