| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0988 |
|---|
| Symbol | |
|---|
| ID | 4693073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1101008 |
|---|
| End bp | 1101493 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639848766 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_995783 |
|---|
| Protein GI | 121607976 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.645815 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCG TTGTCAACAA ACCCCTGCCT GAATTTGAAA CCAACGCCAC CGGTGGCATC
AAGGTCTCCA ACAGCTCCCA CCTGGGCCAG ATTCTGGTGC TTTACTTTTA TCCCAAGGAC
AACACGCCTG GTTGCACCAC GGAGGCCATG CAGTTTCGCG ACCGCTACAA GGACTTCGTG
AAAGCCGGCG CTGCCGTGTT CGGCGTGTCG CGCGACAACA TGAAGTCGCA CGACGACTTC
AAGGAAAAGC TGGAACTGCC CTTTGAACTC ATCGCCGACA CCGAAGAGAA AATGTGCCAT
ATGTTCGGCG TGGTCAAGAA CAAGATCATG TACGGCAAAA AGGTCAAGGG CATCGAGCGC
AGCACCTTCC TGATCGGCCC CGATGGCCTG CTGGTGCAGG AATGGCGCGG TCTGAAAGTG
CCGGGCCATG TGGATGAAGT CCTCAAGACG GTCAAATCCA TCAAGACCCT GAAAAAGGCC
GCTTGA
|
|---|
| Protein sequence | MAIVVNKPLP EFETNATGGI KVSNSSHLGQ ILVLYFYPKD NTPGCTTEAM QFRDRYKDFV
KAGAAVFGVS RDNMKSHDDF KEKLELPFEL IADTEEKMCH MFGVVKNKIM YGKKVKGIER
STFLIGPDGL LVQEWRGLKV PGHVDEVLKT VKSIKTLKKA A
|
|---|
| |