| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0964 |
|---|
| Symbol | holA |
|---|
| ID | 4692835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1077178 |
|---|
| End bp | 1078233 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639848743 |
|---|
| Product | DNA polymerase III subunit delta |
|---|
| Protein accession | YP_995760 |
|---|
| Protein GI | 121607953 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0100805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCG CGCTGGCCCA ACTGTCCGAG CATCTTCAAC GGGGTCTGGC GCCGCTGTAT
GCGCTGCATG GCGACGAACC GCTGCTGCAA CAAGAGGCGG TGGACGCCAT CCGCGCTGCG
GCCCGGGCAC GGGGCTATAC CGAGCGCAGC GCATTCACTG TGGCCGGCGC CCATTTCGAC
TGGAGCGCAG TGCTGGCCGC CGGTGGCTCA TCGAGCCTGT TTGCCGAGCG GCAGATCGTC
GAAATCCGCA TCCCCACGGG CAAGCCCGGC AAGGACGGCA GCGCGGCCTT GCAGCGGCTG
GCCGCATCGG CCCAAGGCAA CGACAACACC CTGACACTGG TGCTGCTGCC GCGCCTGGAC
AAAGCCATGC GCGCCGGGGA CTGGTTTGCC GCGCTCCAGG CCCATGGCAG CACCATACAG
ATCGACCCCG TGGAACGCAG CGCGCTGCCG CAATGGCTGG CCCAGCGCCT GGCCGCCCAG
GGCCAGCGCG TGCTGGCGGG CGAGGAGGGC CAGCGCACGC TGCGGTTCTT TGCCGATCGT
GTCGAAGGCA ACCTGCTGGC CGCCCACCAA GAGATCCAGA AACTGGCCCT GCTGCACCCG
GCCGGCGAAT TGACGCAGGC CCAGGTCGAA GCCGCCGTGC TCGATGTCGC GCGCTACGAC
GTGTTCAAAC TGTCCGAATC GGTGCTGGCC GGGCAGACCG CCCGCGTGCA GCGCATGCTC
GATGGCCTGC AAGCCGCAGG CGAGAACGAA GTGCTGGTGC ACTGGGCGCT GGCCGAAGAC
ATCCGTGCGC TCAAGCGCGT GAAAGACGCG ATGAACGCCG GCCGCCCGCT GCCGCTGGCG
CTGCGCGAAA ACCGCATCTG GGGTCCCCGG GAGCGCCTGT TCGAGCGCAT CCTGCCCCAG
GCCAGCGATG CGGCACTGGC CCGGCTATTG CAATCGGCGC ACATCGTGGA CGGCATCGTC
AAGGGCCTGC GCTGGCCTGA CTGGCCCGCC GATAGTTGGC AGGCATTGCA GCGACTGGCG
CTGCAACTGA GCCGGCTGAC ATCGACCGCG CACTGA
|
|---|
| Protein sequence | MQIALAQLSE HLQRGLAPLY ALHGDEPLLQ QEAVDAIRAA ARARGYTERS AFTVAGAHFD
WSAVLAAGGS SSLFAERQIV EIRIPTGKPG KDGSAALQRL AASAQGNDNT LTLVLLPRLD
KAMRAGDWFA ALQAHGSTIQ IDPVERSALP QWLAQRLAAQ GQRVLAGEEG QRTLRFFADR
VEGNLLAAHQ EIQKLALLHP AGELTQAQVE AAVLDVARYD VFKLSESVLA GQTARVQRML
DGLQAAGENE VLVHWALAED IRALKRVKDA MNAGRPLPLA LRENRIWGPR ERLFERILPQ
ASDAALARLL QSAHIVDGIV KGLRWPDWPA DSWQALQRLA LQLSRLTSTA H
|
|---|
| |