| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0954 |
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| Symbol | |
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| ID | 4693617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1067295 |
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| End bp | 1069082 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639848733 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_995750 |
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| Protein GI | 121607943 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTATC ATGGCCCAAT GGCGCTACCT CAGAGCATTC GATTGGCCGC ATTGGCTTGC
GCGATGACGG TCGTTGCCTG CCCGGCGTTG GCGCAACCGA CCGACGACGA AAGCCGTCCC
GCGACCGAGG CGCCGCCGGT GGCATCCAGC CCGGCCCTGG ACGCCAAGCT GTTCTACGAG
ATCTTCCTGG GTGAATTGAC CACCCGCATG GGTGACCCGG GCGCAGGCTA TGCGCTGATG
CTGGAGGCCG CGCGCCGAAG CGCTGACGGC CAGCTCTACC AGCGGGCTGC GGACATTGCG
TTGCAGTCCC GCTCTGGCGA GCATGCGCTG GCTGCGGCCA GGGCCTGGAA GCAGGCTTTG
CCGCAGTCGC GCGAGGCCAA TCGCTACATG TTGCAAATTT TGGTCGCACT GAACCGGATC
AGGGAGACGC CCGAGCTGCT GCGCCAGGAG TTGGCGCAAT CGTCGGCCCG CGACAAACTG
GCCACGCTGT CTGCCCTGCC CCGGATGTAC GAGCGTGCCA GCGACAAGGC CTTGGTCGCC
AAGGTGGCAG AGCAAGCGCT GGCGGATGAA CTCGGCAACC CCGCCACAGG TTCCGTGGCC
TGGGTGTCGC TGGGACGCTT GCGTCTGGCG GCCGGCGACA AAAGCGGGGC GCTGGATGCG
GCGCACAAGG CGCAAGCACT GGATAACGCC AGCGAAGGCG CCGTGCAATT GGCGCTGGAG
TTGATGCAAG AGAACATTGC GCAAGCCGAG CCGATCGTGC TCCGGGCGCT GGCCAAGCAG
GCCGTCCCCA GGTTGCCTGA ATGGCGTATG GCCTATGCCC GTGTCCTTGC AGGCTTGCAG
CGCAATCAGG ATGCCAGAGG TCTGCTCGAA GCGGTCACAC AAGAAAAACC GGCGCTCGCA
CCGGCGTGGC TGCTGATGGC CTCGTTGCAG TTTCAGGACA ACCGTCTGCC GGAGGCTGAA
ACCTCGTTGC AGCGTTTTCT GGAACTGTCT GCGACGGACA CCGACGAGCA AGTGCGGCAA
AAAAGCCGCA CCCAGGCCTA TTTGCTGTAC GCGCAAATCG CAGAGAAAAA AAATGACTTT
GCGGCTGCAC AGACCTGGCT CGGACGCATA GACGACCCGC AGGGGGTTTT CGGCGCCCAA
ATTCGCCGCG CCTCGCTGTT GGCACGCCAG GGCCAGCTCG CGCAAGCGCG GGCGCTGTTG
CGCAGCCTGC CGGGCAGTTC GGCCGATGAC CAGCGCATGA AGCTGCTGGC CGAAGTGCAG
TTGTTGCGCG AGCAGCGCCT GTACCGGCAG GCGTACCAAG TGCAGGGCGA ACTGGTGGCA
TTGTTCCCGC AGGAGGCAGA GTTGGTCTAC GACCAGGCTC TGCTGGCCGA AAAGGCGGGC
CAGCCCGATC TGATGGAGCA ATTGCTCAGG CAGGTGATTG CGCGCCAACC GCAATACCAC
CATGCCTATA ACGCCCTGGG TTATTCGCTG GCCGATCGTG GCACGCGGCT TGTCGAGGCC
AAACAGTTGA TTTTGAAGGC GCTGGAACTG GCGGCGGGCG ATCCTTTCAT CATGGACAGC
CTCGGTTGGG TGGAGTTTCG CCTGGGCAAC AAGGCCGATG CCAAGCGGTA TCTGGAAGCC
GCTTACAAGA CACGGCCCGA TGTCGAGATC GCAGCCCATC TGGGCGAGGT GCTGTGGAGC
CTGGGCGACA AGGACGCTGC GTCCAGGGTC TGGAAAGAAG GGCAGCGCAG CAACCCTGAC
AACGACACCC TGAAGGAAAC ACTGCAGCGC CTCGGAGTCG CGCCCTGA
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| Protein sequence | MDYHGPMALP QSIRLAALAC AMTVVACPAL AQPTDDESRP ATEAPPVASS PALDAKLFYE
IFLGELTTRM GDPGAGYALM LEAARRSADG QLYQRAADIA LQSRSGEHAL AAARAWKQAL
PQSREANRYM LQILVALNRI RETPELLRQE LAQSSARDKL ATLSALPRMY ERASDKALVA
KVAEQALADE LGNPATGSVA WVSLGRLRLA AGDKSGALDA AHKAQALDNA SEGAVQLALE
LMQENIAQAE PIVLRALAKQ AVPRLPEWRM AYARVLAGLQ RNQDARGLLE AVTQEKPALA
PAWLLMASLQ FQDNRLPEAE TSLQRFLELS ATDTDEQVRQ KSRTQAYLLY AQIAEKKNDF
AAAQTWLGRI DDPQGVFGAQ IRRASLLARQ GQLAQARALL RSLPGSSADD QRMKLLAEVQ
LLREQRLYRQ AYQVQGELVA LFPQEAELVY DQALLAEKAG QPDLMEQLLR QVIARQPQYH
HAYNALGYSL ADRGTRLVEA KQLILKALEL AAGDPFIMDS LGWVEFRLGN KADAKRYLEA
AYKTRPDVEI AAHLGEVLWS LGDKDAASRV WKEGQRSNPD NDTLKETLQR LGVAP
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