| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0952 |
|---|
| Symbol | ipk |
|---|
| ID | 4693681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1065840 |
|---|
| End bp | 1066742 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639848731 |
|---|
| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_995748 |
|---|
| Protein GI | 121607941 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCC TGTATGACCT GCCGGCCCCG GCAAAGCTGA ACCTCTTTTT GCACATCATC
GGACGGCGCG CCGACGGGTA TCACCTGATC GAGTCGGTCT TCATGCTGAT CGACTGGTGC
GATACCCTGC ATTTCGAGTG TCGTGCCGAC GGAGCAATTT CGCGCCAAGA CCTGGGCGCC
CCGCTGCCCG CTGCCGACCT GAGCATACGG GCCGCCCATG CGCTGCGGGC GGCCACCGGC
TGCAGGCAAG GCGCGCATAT CGGGCTGCTC AAACGCCTTC CCGCGCAAGC GGGCATCGGC
GGTGGCTCGT CGGATGCCGC GACCACCTTG CTGGCACTGA ACCGGCTATG GGGTCTGGGC
CTGTCGCTGT CGGCGCTGGA AAAGATCGGC GTGACGCTCG GTGCAGATGT TCCGTTTTTT
GTACGCGGGC GCAACGCCCG GGTGGCGGGC ATCGGCGAGA TCATCACGCC GCTGGCGCAT
GGACAACTGC CGCCGGCATG TTTTGCGGTC GTCAAGCCCG CTGCCGGTCT GGAGACGAAG
GCCATTTTTT CCTCGCCCCT TCTGAAGCGC GCTTCGGGCA GTGCTACAAT CTCCGGCTTT
GCTGCAGCCG ATTTCGGCCG GGATGGCGAC TGCTACCAGG ATGCCGATTT CTGCCGAAAT
GACCTGCAGC CCGTTGCCCA GGCATTGTGC CCCGAGGTCA CCCAAGCCAT CGAATGGCTC
AGAGCGCGCG GGTTGCAAGG CCGGATGACA GGCTCGGGCA GTGCGGTGTT TGCACAGATA
CCACAGGCGC CCGACTTGGG TCACGTTGGT GACTTGGGGG CAGCCCCCGA AGGCTGGCAG
GTCAGGGTCT GTGAGAATCT GATGCTCCAT CCTCTTGCAG GGTGGGCAGC AGACGAGGAT
TGA
|
|---|
| Protein sequence | MQALYDLPAP AKLNLFLHII GRRADGYHLI ESVFMLIDWC DTLHFECRAD GAISRQDLGA
PLPAADLSIR AAHALRAATG CRQGAHIGLL KRLPAQAGIG GGSSDAATTL LALNRLWGLG
LSLSALEKIG VTLGADVPFF VRGRNARVAG IGEIITPLAH GQLPPACFAV VKPAAGLETK
AIFSSPLLKR ASGSATISGF AAADFGRDGD CYQDADFCRN DLQPVAQALC PEVTQAIEWL
RARGLQGRMT GSGSAVFAQI PQAPDLGHVG DLGAAPEGWQ VRVCENLMLH PLAGWAADED
|
|---|
| |