Gene Veis_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0950 
Symbol 
ID4693615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1063890 
End bp1064597 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID639848728 
Product50S ribosomal protein L25/general stress protein Ctc 
Protein accessionYP_995746 
Protein GI121607939 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCG TCGCTTTTGA GCGCGCCAAG CAGGGTACGG GTGCGAGCCG CCGTCTGCGC 
AATTCGGGCA AGACGCCCGG CATCGTGTAT GGTGGTTCGG CCGAGCCCCA AATGATCGAG
CTCGACCACA ACGCGCTGTG GCATGCCCTC AAGAAGGAGG CTTTCCACTC CAGCGTGCTC
GACATGGAGG TGGCCGGCAA GACCGACAAG GTCTTGCTGC GCGACGTGCA ATACCACCCC
TTCAAGCAGT GCGTGCTGCA CATCGACTTC CAGCGCGTCG ACGACAAGAC CAGGCTGCAC
ATGAAGGTGC CGCTGCACTA CAGCGGCTCG GAAGAGTCCA ACGCCGTCAA GGTCGACAAG
TGCATGGTCA ACCTGATCGT CAACGAACTG GACGTGACCT GCATGCCTTC GGACCTGCCG
GAGTTCATCG CCGTCGATCT GTCGAAGTTG GAAAAGGGCA CCTCCCTGCA CCTGAAGGAC
ATCAAACTGC CCCGGGGCGT AACGCCCGTG ATCCGCGGTG GTCAGCACAA CCCGGCCCTG
GTGTCGGTGG TGCCGCCAGT GGTGGTGCTC GAGGCCCCTG TTGCCGACGC CGCTCCAGCG
CCCGTAGCCG AGGCCAAGGG CAAAGGCAAG GCGGCCAAGC CCGCAGCCAC GGCCAAACCT
GCCGCCGCCG CCGCCAAACC CGCAGCAAAA CCCAAGGCGA AAAAGTAA
 
Protein sequence
MNFVAFERAK QGTGASRRLR NSGKTPGIVY GGSAEPQMIE LDHNALWHAL KKEAFHSSVL 
DMEVAGKTDK VLLRDVQYHP FKQCVLHIDF QRVDDKTRLH MKVPLHYSGS EESNAVKVDK
CMVNLIVNEL DVTCMPSDLP EFIAVDLSKL EKGTSLHLKD IKLPRGVTPV IRGGQHNPAL
VSVVPPVVVL EAPVADAAPA PVAEAKGKGK AAKPAATAKP AAAAAKPAAK PKAKK