Gene Veis_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0923 
Symbol 
ID4694962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1024414 
End bp1025100 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID639848697 
Productputative lipoprotein 
Protein accessionYP_995720 
Protein GI121607913 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA TCAAAAGCAA GGCATCTGGT TCTGGCGCCA TAGCCATTCA TGGCCTGGGG 
CTGCTGGGCG CCATGCTGCT GACCGGCTGC GCGGCGCTGC CCGCAGTGCC AACCCGCCCC
ATGCTGTACG ACTTTGGTCC CGCCAGCGTG GCACCGGCAC CGGCCGGGCG CCGTGCAGCG
CTGCCGGCGT TGGTCCTGGC CGATGTAGAG GCGCCGGGCC TGCCCGATGG CAGCAGCGCA
GTGCTCTACC GCCTGGCCTA TGCCGACGCC CGACAACTGC ACCCCTACAG CCATGCCCGC
TGGAGCCAGC CGCCCGCCCA ATTGCTGCAG CAGCAACTGC GCGAGCAGAT CGGCCGGCGC
CGCGCCGTCC TCAAGGCCGA CGACGGCGCT GCCCAGAGCC GGGGCGCCAC CCGCAGCGGC
CATCTGCTGC TGCGCGTGGA ACTGGAGGAG TTCAGCCACC TGTTCAACAG CCCGACACAA
AGCGCCGGCG TCGTGCGCCT GCGCGCCACC ATGGTCGAGC GCACCCCGAC GGGCGAATCA
CTGCGCGGGC AGCGGGTGTT CATCATGCAA AAGCCTGCCC GCTCAACCGA TGCCGCCGGC
GGGGTGGCTG CGCTGGCCGA AGCCTCGACA CAGTTGGCCA GCGAGTTGGC CGAATGGGTG
GAGCAGGTGG AGTCCACGCC GCACTGA
 
Protein sequence
MNTIKSKASG SGAIAIHGLG LLGAMLLTGC AALPAVPTRP MLYDFGPASV APAPAGRRAA 
LPALVLADVE APGLPDGSSA VLYRLAYADA RQLHPYSHAR WSQPPAQLLQ QQLREQIGRR
RAVLKADDGA AQSRGATRSG HLLLRVELEE FSHLFNSPTQ SAGVVRLRAT MVERTPTGES
LRGQRVFIMQ KPARSTDAAG GVAALAEAST QLASELAEWV EQVESTPH