Gene Veis_0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0913 
Symbol 
ID4692679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1014736 
End bp1015506 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID639848687 
Productshort chain dehydrogenase 
Protein accessionYP_995710 
Protein GI121607903 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCT CTTGGCCACT GGCGTCACGG CGCGTTTTGC TCACCGGCGG GCTGGGCAGC 
CTGGGGCAGG CACAGGCGCG CAGACTGCGG GCTGACGGCG CTGATGTGCA TATTTTCGAC
CTGCCATCGC CCCGTGGCGC GGCGTTGGCT GTGGCCTTGA ACCAAGAGGC CGGCCCGGGC
ATGGGGCGCG TGGGCTTCGT TGCCGTCGAC CTGCGCGACA TGGCCGGCGC GCAATCGACG
GTGCGCGCGC TCGAGCGCGA ACAGGGCAGC TTCGACATCC TGATCAACAA CGCTGCGCTG
ATCACCCACA AGCCGTTCGA GGAGTTTTCG CTCGCCGAAT ATGAAGAGGT GATGCAAGTC
AACAGCAGCG CGGGCTTCGC GCTGACACAG GCCGTGGCGC CGGCAATGAA GGCCAAAGGC
TGGGGGCGGA TCATCAACTT TTGCAGCCTG ACGCTCAACG GACGTTGGGA AAAATACGTC
CCCTACGTGG CCTCCAAGGG AGCCATGCTG GGGCAGACCA AAACCTTCGC CCGCGCCCTG
GGGCCCTATG GCATCACCGT GAATGCGGTC AGTCCCGGGG CCATCGTTTC CGAGGCCGAG
CAGCGCGTGT TCGGCGACAA ACTCAAGGAA TACAGCGATT GGGTGCTGGA AAACCAGTCG
CTCAAACGCC GAGGCCAGCC GCAGGACGTG GCGGATCTGG TGGCGTTCCT GGCCAGCGAC
CAAGCCAGTT TCATGACCGG CCAGATATTG GCGCTCGACG GAGGGTGGTG A
 
Protein sequence
MNTSWPLASR RVLLTGGLGS LGQAQARRLR ADGADVHIFD LPSPRGAALA VALNQEAGPG 
MGRVGFVAVD LRDMAGAQST VRALEREQGS FDILINNAAL ITHKPFEEFS LAEYEEVMQV
NSSAGFALTQ AVAPAMKAKG WGRIINFCSL TLNGRWEKYV PYVASKGAML GQTKTFARAL
GPYGITVNAV SPGAIVSEAE QRVFGDKLKE YSDWVLENQS LKRRGQPQDV ADLVAFLASD
QASFMTGQIL ALDGGW