Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0913 |
Symbol | |
ID | 4692679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1014736 |
End bp | 1015506 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639848687 |
Product | short chain dehydrogenase |
Protein accession | YP_995710 |
Protein GI | 121607903 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCT CTTGGCCACT GGCGTCACGG CGCGTTTTGC TCACCGGCGG GCTGGGCAGC CTGGGGCAGG CACAGGCGCG CAGACTGCGG GCTGACGGCG CTGATGTGCA TATTTTCGAC CTGCCATCGC CCCGTGGCGC GGCGTTGGCT GTGGCCTTGA ACCAAGAGGC CGGCCCGGGC ATGGGGCGCG TGGGCTTCGT TGCCGTCGAC CTGCGCGACA TGGCCGGCGC GCAATCGACG GTGCGCGCGC TCGAGCGCGA ACAGGGCAGC TTCGACATCC TGATCAACAA CGCTGCGCTG ATCACCCACA AGCCGTTCGA GGAGTTTTCG CTCGCCGAAT ATGAAGAGGT GATGCAAGTC AACAGCAGCG CGGGCTTCGC GCTGACACAG GCCGTGGCGC CGGCAATGAA GGCCAAAGGC TGGGGGCGGA TCATCAACTT TTGCAGCCTG ACGCTCAACG GACGTTGGGA AAAATACGTC CCCTACGTGG CCTCCAAGGG AGCCATGCTG GGGCAGACCA AAACCTTCGC CCGCGCCCTG GGGCCCTATG GCATCACCGT GAATGCGGTC AGTCCCGGGG CCATCGTTTC CGAGGCCGAG CAGCGCGTGT TCGGCGACAA ACTCAAGGAA TACAGCGATT GGGTGCTGGA AAACCAGTCG CTCAAACGCC GAGGCCAGCC GCAGGACGTG GCGGATCTGG TGGCGTTCCT GGCCAGCGAC CAAGCCAGTT TCATGACCGG CCAGATATTG GCGCTCGACG GAGGGTGGTG A
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Protein sequence | MNTSWPLASR RVLLTGGLGS LGQAQARRLR ADGADVHIFD LPSPRGAALA VALNQEAGPG MGRVGFVAVD LRDMAGAQST VRALEREQGS FDILINNAAL ITHKPFEEFS LAEYEEVMQV NSSAGFALTQ AVAPAMKAKG WGRIINFCSL TLNGRWEKYV PYVASKGAML GQTKTFARAL GPYGITVNAV SPGAIVSEAE QRVFGDKLKE YSDWVLENQS LKRRGQPQDV ADLVAFLASD QASFMTGQIL ALDGGW
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