| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0911 |
|---|
| Symbol | |
|---|
| ID | 4692644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1011937 |
|---|
| End bp | 1013607 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639848685 |
|---|
| Product | glucose-methanol-choline oxidoreductase |
|---|
| Protein accession | YP_995708 |
|---|
| Protein GI | 121607901 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA CCACATTCGA CACCATCATC ATCGGCGGCG GCACCGCAGG CGCGCTGCTG
AGCAACCGCC TGAGCGCCGA CAGCCGCTAC CGCGTGCTGC TGATCGAAGC CGGCAGCAAG
GACGACTACC ACTGGATCCA CATCCCCGTC GGCTACCTGT ACTGCATCGG CAACCCGCGC
ACCGACTGGC TCTACAGCAC CGAGCCCGAA GCGGGCCTGA ACGGCCGCAG CCTGCGCTAC
CCGCGCGGCA AGACACTGGG CGGCTGCAGC AGCATCAACG GCATGATCTA CATGCGCGGC
CAGGCCCGCG ACTACGAGCA GTGGGCGGCA CTGACGGGCG ACACGCGCTG GCGCTGGGAG
CAGGTCCTGC CGTACTTTCG CCGCCATGAA GACCACTGGC GCCTGGACGC ACCGGCCGGC
GTGGCGGAAG AATTCAAGCG CCTGCACGGC AACAAGAGCA CCGGCAGCAC CGGTGAATGG
CGTGTGGAAC GGCAGCGCCT GCGCTGGGAC CTGCTCGACG CATTTGCCCA GGCGGCGCAG
CAGGCCGGCA TACCGGCCAC GGACGACTTC AACAGCGGCA ACAACGAGGG CGTGAGCTAC
TTCGAGGTGA ACCAGAAAAG CGGCTGGCGC TGGAACAGCG CCAAAGCCTT TTTGCGCCCC
CGTTGCTACG GCCGCCCGCA CTTCGAGATG TGGACCAGCG CCCTGGCCAC CCGGCTCATC
ATCGACCGGC AGCCCGACGG CAGCAAGCGC TGCACCGGCG TGCAGGTCTG GGACGGTCGC
GAGATGGTCA CGGCGCGCGC CAGCGGCGAG GTCATCCTGA GCGCCGGCGC AGTCAATTCA
CCGCAACTGC TGCAACTCTC GGGCATCGGC CCGGCAGCGC TGCTGCGCCG GCATGGCATC
GATGTGCTGC ACGAACTACC CGGCGTCGGC GCGAACCTGC AAGACCACCT GCAGATCCGC
GCAGTGTTCA AGGTGCAAGG CGTGCAGACA CTCAACACCA TGGCCAGCAC GCTCTGGGGC
AAAGCCAGGA TCGGGTTGGA ATACGCCATC AGGCGCAGCG GCCCGATGAG CATGGCCCCT
TCGCAACTCG GCGCCTTCAC CCGCAGCAAC CCGCAGCAGC CCCATCCCGA CCTGCAATAC
CATGTGCAGC CGCTGTCGCT GGATGCGTTT GGCGAGCCGC TGCACCGCTT TGCGGCCTTC
ACGGCCAGCG TGTGCAACCT CAACCCCGGC AGCCGTGGCA CGGTGCAGAT CAAAAGCGCC
GACTTCCAGA CCGCCCCCGC GATTGCGCCG CACTACCTGA GCACCCCCGA AGACCGCCAG
GTGGCCGCCG ACAGCCTGCG CCTGACGCGC CGCATCGTGG CCCAGCCCGC GCTGGCCAAG
TACCAGCCGC AGGAGTGGAA ACCCGGAGTG CAGTTCCGGA CGGACGAAGA CCTGGCCCGT
CTGGCCGGTG ACATCGCCAC CACCATCTTC CACCCCACGG GAACCACGAA GATGGGCCGC
GACGACGACC CGATGGCCGT GCTGGACCCG CAACTGCGCG TGCGCGGCAT CGCCGGACTG
CGCGTGGTCG ACGCCGGCGC CATGCCCACC ATCACCAGCG GCAACACCAA TGCGCCCACG
CTGATGCTGG CCGAAAAGGC GGCCGAGTGG ATCATTCAGG AACGCGGCTG A
|
|---|
| Protein sequence | MSDTTFDTII IGGGTAGALL SNRLSADSRY RVLLIEAGSK DDYHWIHIPV GYLYCIGNPR
TDWLYSTEPE AGLNGRSLRY PRGKTLGGCS SINGMIYMRG QARDYEQWAA LTGDTRWRWE
QVLPYFRRHE DHWRLDAPAG VAEEFKRLHG NKSTGSTGEW RVERQRLRWD LLDAFAQAAQ
QAGIPATDDF NSGNNEGVSY FEVNQKSGWR WNSAKAFLRP RCYGRPHFEM WTSALATRLI
IDRQPDGSKR CTGVQVWDGR EMVTARASGE VILSAGAVNS PQLLQLSGIG PAALLRRHGI
DVLHELPGVG ANLQDHLQIR AVFKVQGVQT LNTMASTLWG KARIGLEYAI RRSGPMSMAP
SQLGAFTRSN PQQPHPDLQY HVQPLSLDAF GEPLHRFAAF TASVCNLNPG SRGTVQIKSA
DFQTAPAIAP HYLSTPEDRQ VAADSLRLTR RIVAQPALAK YQPQEWKPGV QFRTDEDLAR
LAGDIATTIF HPTGTTKMGR DDDPMAVLDP QLRVRGIAGL RVVDAGAMPT ITSGNTNAPT
LMLAEKAAEW IIQERG
|
|---|
| |