| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0906 |
|---|
| Symbol | |
|---|
| ID | 4692561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1007386 |
|---|
| End bp | 1008150 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639848680 |
|---|
| Product | regulatory proteins, IclR |
|---|
| Protein accession | YP_995703 |
|---|
| Protein GI | 121607896 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAACAC CTGAGAGTGA ATCGTTTGTG CGCACCTTCG CCCGGGGTCT CCTGGTTATC
GAGGTCTTGG GTCAAACCCA CGGTGGGCAG TCGTTGGCCG AGGTCGCCGA GAAGGCCCGA
TTGCCACGAA CCGCCGTGCG CCGATTTCTC CTCACACTCA TCGACATGGG CTTTGTGCGC
ACCGATGGCA AGCGCTATCG GTTGACGCCA CGGGTACTCA GGATCGGCCT GTCGTACCTG
TCATCCCTGC CCTATTGGCG CGATGCGCAG TTGGCGCTGG AGGAGTTGCG GGCGCGGATC
GATCAGTCCT GCGCGCTATC GGTTCTGGAT GGCGAGGACC TGGTTTACGT GCTGCGCCAG
CATGCCAAGC GCATCCTGCC GATGAGCCCC TCTTTGGGCA GCCGGCTGCC CGCCCATGCC
GTGTCCATGG GCCGGGTGCT GCTCGCGGGC CTGTCAGACG CAGAACTTGA CGCCTACCTG
GCCGGCGCGA CCTTCAAGCG CTTGACCCGC GCCACCATCG TTGCTGCCGC GCCGCTGCGA
CGGGAGGTCT TGCGCGCGCG CGAGCAAGGA TATGCCTGGG TCGCCGGGGA ACTCGACGAG
TCGATCTGCG GTCTTGCGGT CCCCGTTCGG GACCGCGACG GACAGACCGT TGCGGCGATG
AATGTCAGTC TGGCCACCGG AGAGTTCACC GAGGCCGAGG CCGTGGCCCA ATTTCTCGGC
GAGCTTCGGG TTGCCGCATC GCGCTTGCGC GCAAGCAGCC GATGA
|
|---|
| Protein sequence | MATPESESFV RTFARGLLVI EVLGQTHGGQ SLAEVAEKAR LPRTAVRRFL LTLIDMGFVR
TDGKRYRLTP RVLRIGLSYL SSLPYWRDAQ LALEELRARI DQSCALSVLD GEDLVYVLRQ
HAKRILPMSP SLGSRLPAHA VSMGRVLLAG LSDAELDAYL AGATFKRLTR ATIVAAAPLR
REVLRAREQG YAWVAGELDE SICGLAVPVR DRDGQTVAAM NVSLATGEFT EAEAVAQFLG
ELRVAASRLR ASSR
|
|---|
| |