| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0885 |
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| Symbol | |
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| ID | 4692241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 986770 |
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| End bp | 987855 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639848659 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_995682 |
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| Protein GI | 121607875 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.216683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.449313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGC AAAGGCTCCA GCAAGACCGG CACGCAGGCG TTTCACGCCG CAACTTCATC
CAACGGGGCG CAGGCACCGC ATTTGCCGTG GCTGGCAGCG GCATGCCGGG CCTGTCGTTC
GGGACGGGGC CGACCACGCT CGCCTGTTCG TTCCGCTCAC TCACCAATCC CTACCACGCC
GCATTCAACA AGGGCGCGCA GAGCTTTGCG AAAAGCGTCG GGCTGCCCTA CGTGCCGCTC
ACCACGGAAG GCAGTTCGGA AAAGGGCATC GCGGACATTC GCGCCTTGCT GCAAAAGACG
GGCGGCAACC TCGTCCTCAA TGTCGATCCG AACGATTCGG CTGATGCGCG GGTGATCGTC
GAGACCTGCG CCAAGGCTGG CGCGCATGTG ACGACGATCT GGAACAAGCC GAACGATTTT
CACCCGTGGG ACTTCAACCC GCACTACGTC GCGCACCTGT CGTTCGACGG GCTCGCTTAT
GGCGCGGCCA CCGCGACTGA ATTGTTCAAG GCCATGGGGG GCCAGGGCGG TGTCGTGGCG
CTCGGCGGCA TTTTCAGCAA CGTGCCAGCC ATCGAGCGCA AGGCTGGCCT GATGGCGGCG
CTGAAAAAAT TCCCGGATAT CCAGCTGCTG GACTTCCAGG TCGCGGACTG GGACTCGCAA
AAGGCCTTCC CCATCATGCA GGCATGGCTG ACCCGTTTCA ACACGAAGGT CAAGGGCGTG
TGGGCCGCCA ACGACGACAT GGCGCTGGGC GCCATCGAAG CCTTGCGCGC AGAAGGACTG
GCCGGCCAGC TTCTGGTGTC CGGCATGGAC GGCACGCAAC CCGGACTCGC CGCGCTCAAG
GCCGGCGAAC TCGTGGCAAC GGTTGACTGG GACCCTTATT GGCTGGGTGG CGTCGGCCTG
TCGATGGGGC TTTCTGCACA GCAGAAAAAA ATGGATGTCG CCCGTTTGCC AAAGGAGCGG
CGCGAGTCAT TCTGCAAGGC GACACTGGTC TCGAAAGCCA ATCTGCAAGC CGTCCTTGCC
CGCAGGGCGA CACCGGCGGC CGACTGGAAC GATGCCCGTG TGGCCGGCCC TCTGGTGTAT
CGATGA
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| Protein sequence | MFKQRLQQDR HAGVSRRNFI QRGAGTAFAV AGSGMPGLSF GTGPTTLACS FRSLTNPYHA
AFNKGAQSFA KSVGLPYVPL TTEGSSEKGI ADIRALLQKT GGNLVLNVDP NDSADARVIV
ETCAKAGAHV TTIWNKPNDF HPWDFNPHYV AHLSFDGLAY GAATATELFK AMGGQGGVVA
LGGIFSNVPA IERKAGLMAA LKKFPDIQLL DFQVADWDSQ KAFPIMQAWL TRFNTKVKGV
WAANDDMALG AIEALRAEGL AGQLLVSGMD GTQPGLAALK AGELVATVDW DPYWLGGVGL
SMGLSAQQKK MDVARLPKER RESFCKATLV SKANLQAVLA RRATPAADWN DARVAGPLVY
R
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