| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0884 |
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| Symbol | |
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| ID | 4694945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 984983 |
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| End bp | 986644 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639848658 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_995681 |
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| Protein GI | 121607874 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.275807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.461656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGACT ATGTGATCGT GGGCGGCGGC GCGGCGGGTT GCGCACTGGC GGCTCGTCTG
AGTGAAGAGG CCGGCATGCG GGTGCTGCTG CTGGAGGCCG GCCCTGCCGA CACCGATCCC
TACATCCATA TGCCGGTGGG ATTTTTCAAG ATGACCGATG GCCCCTTGAC ATGGGGTTAT
CGCACCGTGG CGGCTGCGGC AACGCAAAAG CGGCGGATTC CCTTCGCACA GGGCCGGGTG
CTCGGCGGCG GTAGTTCGAT CAATGCGATG GTCTACACCC GCGGCCAGCC TGCCGACTAC
GATGGCTGGG AGCGCGATGG CTGCACCGGC TGGGGTTTTC ATGATGGCGT GTTGCCGTAC
CTGCGGCGCA TGGAAGACAA CGAGCGCCTG TGCGACCCAT ACCATGGCGT GGGTGGTCCG
CTGGGCGTGT CCGACCTCAT CAGCGTCAAC GAACTGACCA AAGCCTTCGT GCGCGCCGGC
CAGGAAGCGG GCATGCCGCA CAACAGCGAT TTCAATGGCG CGCAGCAAGA AGGTGTGGGG
GTGTATCAGG TCACGCAGCG CAATGGCAGG CGTTGCAGTG CGGCGGCTGG CTATCTGCGC
CAGGCGCGCT CGCGTCCCAA TCTCACGGTT CGCACCGACT GCCTGGCGTT GCGCGTGGTG
ATCGAGAATG GCCGCGCTGC CGGCGTCGAG TTTGCCCCGC GTGGCGAGCG CGCCAGCGTG
ACGATGGTGC GCGCCCGCCG CGAGGTGATC GTGACGGCGG GCGCGATTGG TTCGCCGAAG
TTGCTGATGC TCTCCGGCAT TGGCCGCGCG CAAGACCTGG AGCGCGTCGG CGTCCAGCCC
GTGCATGTGC TCGACGGCGT CGGACAGAAT CTGCAAGACC ACTTCGATAT CGATATCGTC
TACGAACTCA ATGGCCCGTA CAGCCTGGAC AAGTACGCGA AAAAACACAT GATGCTGCTC
GCCGGACTGG AATACAAACT GTTCAACAAG GGGCCGGTGA CCTCGAACAT CGCCGAAGCC
GGGGCCTTTT GGTATTCAGA CGGCAGCGTG CCCACGCCTG ACCTGCAATT TCATTTTTTG
CCGGGCGCGG GTGTCGAGTC CGGCGTGCCG CCGGTGCCAT CCGGCTCGGG CTGCACGCTC
AATTCCTATT TCCTGCGGCC GCGCAGCCGG GGCAGCGTCA CGCTGCACAG CGCCGACCCC
GCTGATGCGC CGCGGATCGA TCCCGCTTAC ATTCGCGACC CGCACGACCT GAAGATTGCC
GTCGAGGGCA TACGCCAGAG TCGGGAAATC ATGCGCCAGA GCGCCTTGCG CAAGTACCTC
ACGCGCGAGC ACTTCCCGGG CGACAAGGTG GCCTCGCAGG CCGAGTACGA AGCCTATGCG
CAAGCGTATG GCCGCACCGG GTACCACCCC GTCGGCACCT GCAAGATGGG CATCGACGAG
CTGTCGGTGG TCGATCCACA ACTGCGCGTG CATGGCATCG AGGGTCTGCG GGTGGCGGAT
TCGTCAGTGA TGCCGCGCAT CGTCAGCTCG AACACGAACG CCGCCACGCT CATGATCGCG
GAAAAGGCGG CTGATCTGAT ACGCGGTCTG GTGGCGCAGC CAGCGCGCGA GCAGGCAGGC
ACATTAGGCT CCATGCGACC CCGCAAGGCC ATGGCAGCCT GA
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| Protein sequence | MYDYVIVGGG AAGCALAARL SEEAGMRVLL LEAGPADTDP YIHMPVGFFK MTDGPLTWGY
RTVAAAATQK RRIPFAQGRV LGGGSSINAM VYTRGQPADY DGWERDGCTG WGFHDGVLPY
LRRMEDNERL CDPYHGVGGP LGVSDLISVN ELTKAFVRAG QEAGMPHNSD FNGAQQEGVG
VYQVTQRNGR RCSAAAGYLR QARSRPNLTV RTDCLALRVV IENGRAAGVE FAPRGERASV
TMVRARREVI VTAGAIGSPK LLMLSGIGRA QDLERVGVQP VHVLDGVGQN LQDHFDIDIV
YELNGPYSLD KYAKKHMMLL AGLEYKLFNK GPVTSNIAEA GAFWYSDGSV PTPDLQFHFL
PGAGVESGVP PVPSGSGCTL NSYFLRPRSR GSVTLHSADP ADAPRIDPAY IRDPHDLKIA
VEGIRQSREI MRQSALRKYL TREHFPGDKV ASQAEYEAYA QAYGRTGYHP VGTCKMGIDE
LSVVDPQLRV HGIEGLRVAD SSVMPRIVSS NTNAATLMIA EKAADLIRGL VAQPAREQAG
TLGSMRPRKA MAA
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