Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0851 |
Symbol | |
ID | 4691973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 946233 |
End bp | 946958 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639848625 |
Product | TetR family transcriptional regulator |
Protein accession | YP_995648 |
Protein GI | 121607841 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCTG CCGCCAAACC CCGGACTGCC GCGCGCCGCA CAGGCGCCCG CGAACAGGCG GCGCAGGCCA CGCGCGACAG CATTCTGAAA GCGGCGACCA AGGTGTTTGC GCGCTATGGC TACGAAGGCG GCAGCGTGGA GAAGATCTCC AAAGCCGCCA AGTCCTTCGA CCGGATGATT TACTACTACT TCGGCAGCAA GGAAGGTCTG TTCATCGAAG TGCTCGAAGC CATCTACCGG CGCATGAACG AGGCCGAATC CAGGCTGGCC CTCGATATCG ACGCTCCGGT GGAGGCTTTG CAGGCGGTGA TCCGCTTCGT GGTCGGCTAC TACCGCAAGA ACCCCGAATT CGTCACGCTG CTGAACACCG AAAACCTGCA CAAGGGCCGG CATATCGCCA AATCGATGCG CGCCCGGGAG TACTCGTCGC CCGCCATCGC GGTGATCGGC CAGGTGCTGG CCAGCGGCCA GGCGCAAGGG CTTTTCCGCC AGGATGTCGC GGCGCGCGAC ATCTACCTGC TGATCGCCGC CACCGGCTAC TTCTACATGT CCAACCGGCA CACGCTGTCG GCCTTCCTCG GCGAAGACCT GGAAAGCGCC CAGGCGCTGG CGCATTGGGA GCGCTTCGTG ATCGACAGCG TGCTGCGCAC CGTGGCCCCG GGCCCTTGCC TGCCCCGCGC CCAACCCGCT GACTCCATCC ACCCACCCCG CGCGGAGGCC CCATGA
|
Protein sequence | MPAAAKPRTA ARRTGAREQA AQATRDSILK AATKVFARYG YEGGSVEKIS KAAKSFDRMI YYYFGSKEGL FIEVLEAIYR RMNEAESRLA LDIDAPVEAL QAVIRFVVGY YRKNPEFVTL LNTENLHKGR HIAKSMRARE YSSPAIAVIG QVLASGQAQG LFRQDVAARD IYLLIAATGY FYMSNRHTLS AFLGEDLESA QALAHWERFV IDSVLRTVAP GPCLPRAQPA DSIHPPRAEA P
|
| |