Gene Veis_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0822 
Symbol 
ID4691054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp912674 
End bp913597 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content57% 
IMG OID639848597 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_995620 
Protein GI121607813 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGA ATCAAACCCC TGCCGACAGC GCCATCGACA AACCCCGGAC GAGGCGCTGG 
GGGCGTTACA GCGTGATTGG CATTCCCTAC CTCTTTTTGG CGCTGCTGTT CACCATTCCA
TTTCTGGTGG TGCTGCGTTT GAGCCTGACG GAAATGGACG GGGCGCGGAT CATGGCCCTG
AGCAGCTATG CCGACGGGTT CATCCACATC AGGATCAAAC TGGCCAACTA TATTTTTCTG
GTAACCGACG ATCTGTATGT GGACACCTAC ATTTCCTCGG TGAAATTCGC GCTGATCAAC
ACACTCATCT GCCTGGCGCT GGGCTATCCC TTCGCCTATT TCATGGCGCG CTCGCCGGCA
AGCGTGCGCC CGGCGCTGCT GATGCTGGTG TCCCTGCCCT TCTGGACTTC CTACCTGTTG
CGGGTGTATG CGTGGAAAGG GCTGCTGGAC GACAACGGGG TGTTCAACAA TGTCCTGATG
GGGCTGCACC TGATCGATGA GCCCATCAAA ATGATGTACA CCAGTTTCTC CATGGTGCTG
GGCATGGTCT ATACCTATCT GCCGTTCATG ATTCTTCCGC TGTATGCCAA TCTGGTGAAG
ATGGATCTGC GCTTGCTGGA AGCGGCCAAG GATTTGGGCG CCACGCCATT CAAGACATTC
TGGCTGGTCA CCGTGCCTTT GTCCAAGAAC GGAATCATTG CCGGCGCCAT GCTGGTATTC
ATTCCCAGTG TGGGGGAGTA TGTGATTCCC GAACTGCTGG GCGGCCCCGG CACGCTGATG
ATAGGGCGCG TGCTCTGGGA CGAATTTTTC AGCAACAACG ACTGGTCCAT GGCCTCTGCG
GTGGCCGTCA GCATGGTGCT GCTGATCTTG CTCCCGCTGG TGATTTTCAA TAAGCACCAA
ACCAAAGCCG GCAGGGGAGC CTGA
 
Protein sequence
MGVNQTPADS AIDKPRTRRW GRYSVIGIPY LFLALLFTIP FLVVLRLSLT EMDGARIMAL 
SSYADGFIHI RIKLANYIFL VTDDLYVDTY ISSVKFALIN TLICLALGYP FAYFMARSPA
SVRPALLMLV SLPFWTSYLL RVYAWKGLLD DNGVFNNVLM GLHLIDEPIK MMYTSFSMVL
GMVYTYLPFM ILPLYANLVK MDLRLLEAAK DLGATPFKTF WLVTVPLSKN GIIAGAMLVF
IPSVGEYVIP ELLGGPGTLM IGRVLWDEFF SNNDWSMASA VAVSMVLLIL LPLVIFNKHQ
TKAGRGA