Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0804 |
Symbol | |
ID | 4690961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 889220 |
End bp | 890524 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639848579 |
Product | extracellular solute-binding protein |
Protein accession | YP_995602 |
Protein GI | 121607795 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.793174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG CCTTGCGCTG CCCGAGCCTG CACGCCCTCG CCGCTGTGGT TGCAATCTTG TGCGCCGGCG CCACCGGCGC CCAGGATTTC AACTGGAAAA AGCACCAGGG CAAGACATTG ACCTTTCTGG CCAACAACAA CCCCGTGGCC AACGCGCTGC TCAAGTACCA GGGCGAGTTC GAGCAGCAAA CGGGCATGAC GCTCAAGGTC GACGCCTATC AGGAGCAGCA GATGCGCCAG CGCCTGGTCA CGGTGATGAA TGCGCGCAGC GACGAGGTGG ATGTGTTCAT GTCGCTGCCC TCGCGCGAGG GCTTGCAGTT CGCCAAGGCC GGCTGGTACG CCGACCTCGC GGAACTGCTC AAGAGCGCGA GCGCCAGGGA CTACGACGCC ACCGGCTTGA GCGCCGGCAT GATCCGGGAC GCCACCTACG GCAAGCAACT CACCGGCATT CCGATGAATG TCGAAGGCCC GGTGCTCTAC TACCGCAAGG ACTTGTTGCG CAAATGCGGC CTGGCATTGC CCGAGAGCCT GACCGGGTTG GAGGCCGTGG CGGCCAAGCT CAAGCGTTGC GAGCCTGGCA TCGCGCCCTT CGTCTCGCGC GGCTTGAAGC CTGCCCTGCC ATTTACCCAC AGCGTGTTCC TGCGCAACAT GGGCGGCCAG TACATGAAGG ACGGCCGATC GCAACTGTGC AGCCAGGCCG GCCAAGCCTC GCTGGCGCTG TACGCCAGAC TGCTCAAGGA CTACGGCCCG CCGGGTGTCG TGAACTACAA CTTCTATCAG ATCTCCTCGC TCTACAAGGA GGGCAAGGCG GCGATGGCCT TCGAGTCCTC GAACGAGTTG CGCAACATGA TGGACGGCGG CGCCCGCCTG AAGGACACGG CGGTCGCCGT GCTGCCGGCG GGCCCTGGCG GCTCGCGCCC GACCGTGATC GGCTGGATCA TGTCGGTGTC GGCGCACAGC AAGCACAAGG AGGCCGCCTG GTACTTCGTG CAATGGGCCA CCAGCCCCGC GATCCAGGCC AGGCTGGCGC TCGACGGGAT AGCGCCGCCG CGCGCGGCCG TGGCCCAGGC GCCCGGCTAT AAAGCCTGGA TGGACGAGCA GCCGGTGCGC TCCGAATGGG TCGCGGCCGT CAACGAACTG GCGCGCACCG GCACTTCCGA AGTGGGCTAC CCGATCGCCG CCAATCCGGC CTCGCGCGAG CTCATCGGCC AGGCGGTCAC CGAATTGCTG CTCGGCCAGA AACTGCCGGC ACAGGCCTGC GCCGATGCGG ACAGGCAGCT CGATGCGTTG ATCGCCAAAG AGTGA
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Protein sequence | MSQALRCPSL HALAAVVAIL CAGATGAQDF NWKKHQGKTL TFLANNNPVA NALLKYQGEF EQQTGMTLKV DAYQEQQMRQ RLVTVMNARS DEVDVFMSLP SREGLQFAKA GWYADLAELL KSASARDYDA TGLSAGMIRD ATYGKQLTGI PMNVEGPVLY YRKDLLRKCG LALPESLTGL EAVAAKLKRC EPGIAPFVSR GLKPALPFTH SVFLRNMGGQ YMKDGRSQLC SQAGQASLAL YARLLKDYGP PGVVNYNFYQ ISSLYKEGKA AMAFESSNEL RNMMDGGARL KDTAVAVLPA GPGGSRPTVI GWIMSVSAHS KHKEAAWYFV QWATSPAIQA RLALDGIAPP RAAVAQAPGY KAWMDEQPVR SEWVAAVNEL ARTGTSEVGY PIAANPASRE LIGQAVTELL LGQKLPAQAC ADADRQLDAL IAKE
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