Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0796 |
Symbol | |
ID | 4690593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 880984 |
End bp | 881817 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639848571 |
Product | 2-dehydro-3-deoxyglucarate aldolase |
Protein accession | YP_995594 |
Protein GI | 121607787 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACAC CCACCAACCT TTTCAAGCAA GCCATCGCGC AACGCCAGGC ACAAATCGGC CTGTGGCTCG GACTGGCCGA CGCTTACAGC GCCGAGCTTC TTGCGAGCAC AGGCTACGAC TGGCTGCTGG TCGACGGCGA GCATGCGCCC AACGACCTGC GCTCGATACT GCACCAGTTG CAGGCCATCG CCAGCGCCAC CAGTGCCCTG CCCGCCGGCG CGCCGGCGCC CCATCCGATC GCCCGCGTGC CGATCGGCGA CCAGACGTTG ATCAAGCAGT ACCTGGACAT CGGCGTGCAG ACGCTGCTGG TGCCGATGGT GGACACGGCC GAGCAGGCGC AGGCCCTGGT GCGCGCCACG CGCTACGCCC CGGCGGGCAT GCGCGGCATG GGCAGCGCCA TGGCGCGCGC CTCGCGCTGG CAGTCCTATC CGGACTATGT GCACCAGGCC GACCAGCAGA TATGCCTGCT GGTGCAGGCC GAAACCGTGC AAGCCTTGGG CAACCTCGAC GCCATCGCCG CCACGCCGGG AGTCGATGGC GTGTTCATCG GCCCGGCGGA CCTGTCGGCC TCGATGGGCC ATCCGGGCCA CCCCGAGCAC CCGAGCGTGC AGGCCGCGAT CCAAGACGGC ATCGGGCGCA TCCTGCGCGC CGGCAAGGCC CCGGGCATTC TGGTCACCAG CGAGCCCCAG GCGCACCAGT GGCTGGCGGC CGGCGCCCTG TTCGTCGCGG TCGGGGTGGA CGCGCAACTG CTGGTCAACG CAGCCAGAAA ACTGCTGGCC GGTTTTCGCG CCGTGCCCGC CGGCGGGCAA GCCCCCCGCG CTGCCGGTTA CTGA
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Protein sequence | MHTPTNLFKQ AIAQRQAQIG LWLGLADAYS AELLASTGYD WLLVDGEHAP NDLRSILHQL QAIASATSAL PAGAPAPHPI ARVPIGDQTL IKQYLDIGVQ TLLVPMVDTA EQAQALVRAT RYAPAGMRGM GSAMARASRW QSYPDYVHQA DQQICLLVQA ETVQALGNLD AIAATPGVDG VFIGPADLSA SMGHPGHPEH PSVQAAIQDG IGRILRAGKA PGILVTSEPQ AHQWLAAGAL FVAVGVDAQL LVNAARKLLA GFRAVPAGGQ APRAAGY
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