Gene Veis_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0796 
Symbol 
ID4690593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp880984 
End bp881817 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content70% 
IMG OID639848571 
Product2-dehydro-3-deoxyglucarate aldolase 
Protein accessionYP_995594 
Protein GI121607787 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID[TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACAC CCACCAACCT TTTCAAGCAA GCCATCGCGC AACGCCAGGC ACAAATCGGC 
CTGTGGCTCG GACTGGCCGA CGCTTACAGC GCCGAGCTTC TTGCGAGCAC AGGCTACGAC
TGGCTGCTGG TCGACGGCGA GCATGCGCCC AACGACCTGC GCTCGATACT GCACCAGTTG
CAGGCCATCG CCAGCGCCAC CAGTGCCCTG CCCGCCGGCG CGCCGGCGCC CCATCCGATC
GCCCGCGTGC CGATCGGCGA CCAGACGTTG ATCAAGCAGT ACCTGGACAT CGGCGTGCAG
ACGCTGCTGG TGCCGATGGT GGACACGGCC GAGCAGGCGC AGGCCCTGGT GCGCGCCACG
CGCTACGCCC CGGCGGGCAT GCGCGGCATG GGCAGCGCCA TGGCGCGCGC CTCGCGCTGG
CAGTCCTATC CGGACTATGT GCACCAGGCC GACCAGCAGA TATGCCTGCT GGTGCAGGCC
GAAACCGTGC AAGCCTTGGG CAACCTCGAC GCCATCGCCG CCACGCCGGG AGTCGATGGC
GTGTTCATCG GCCCGGCGGA CCTGTCGGCC TCGATGGGCC ATCCGGGCCA CCCCGAGCAC
CCGAGCGTGC AGGCCGCGAT CCAAGACGGC ATCGGGCGCA TCCTGCGCGC CGGCAAGGCC
CCGGGCATTC TGGTCACCAG CGAGCCCCAG GCGCACCAGT GGCTGGCGGC CGGCGCCCTG
TTCGTCGCGG TCGGGGTGGA CGCGCAACTG CTGGTCAACG CAGCCAGAAA ACTGCTGGCC
GGTTTTCGCG CCGTGCCCGC CGGCGGGCAA GCCCCCCGCG CTGCCGGTTA CTGA
 
Protein sequence
MHTPTNLFKQ AIAQRQAQIG LWLGLADAYS AELLASTGYD WLLVDGEHAP NDLRSILHQL 
QAIASATSAL PAGAPAPHPI ARVPIGDQTL IKQYLDIGVQ TLLVPMVDTA EQAQALVRAT
RYAPAGMRGM GSAMARASRW QSYPDYVHQA DQQICLLVQA ETVQALGNLD AIAATPGVDG
VFIGPADLSA SMGHPGHPEH PSVQAAIQDG IGRILRAGKA PGILVTSEPQ AHQWLAAGAL
FVAVGVDAQL LVNAARKLLA GFRAVPAGGQ APRAAGY