| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0790 |
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| Symbol | |
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| ID | 4692170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 874485 |
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| End bp | 876179 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639848565 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_995588 |
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| Protein GI | 121607781 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000243733 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGA TGAACGGCGC CGAGGCCATG GTGCGCATGC TGCAACTCAA TGGCGTCAAG
CATATCTTCG GCCTCTGCGG CGACACCAGC CTGCCCTTCT ACGACGCTTT GGCCCGGCTG
GACCACGGCA TGGAGCACAT CCTCACGCGC GATGAGCGCA GCGCCGCCTA CATGGCCGAT
GCCTACGCCC GCGTGACCGG CAAAGTCGGC GTCTGCGAAG GCCCCAGCGG CGGCGGGGCC
ACCTACCTGC TGCCTGGCCT GGTCGAGGCC AATGAATCCT CGATCGCCGT GCTGGGCATC
ACCAGCGATG TCCCGGTCGG ATCGCGCGGC AAATACCCGC TCACCGAACT CGACCAGCAA
GCGCTGTATC GACCGCTGAC GAAGTGGAAC GCCCGTGTCG ATCGCGTCGA TCAGCTCCCG
GGCATCGTGC GCAGCGCGTT TCGCGCGATG ACCACAGGGC GTCCGGGAGC GGCGCATATC
TGCCTGCCCC ATGACGTTCA AAAGCATGAG GCAGACGCGC AGGACATCTG GGCACAGCCC
GGCCATGACC GCTTTCCGGC CATGCGCTAT GCAGCCGATC CGGCCGAGAT CGACACTGCC
GCAGCCCGGC TGACCGCAGC GCAATCGCCC GTCATCATGT GCGGCGGCGG CCTGGTCATC
TCCGGCGCCT GCGGCGAGCT CGACACCTTG GCCAGGCTGT TGAACGCGCC CGTGGTGACG
ACGATCAGCG GACAAGGCAG CCTGGCAGAC ACGCACCCGC TCAACGCCGG CGTCGTTGGC
GCCAATGGCG GCAGCCATGC CACGCGCGCC ATTCTCGGCA ACGCCGACCT GGTGCTGCTC
ATCGGCTGCA GGGCCGGATC GACCTCGACC GAGCACTGGA CTTACCCGTC ACGACGAATC
CCGGTGCTGC ATCTCGATGT CGATCCGATG GCGATTGCCG CCAACTACCG CACCGATGTC
GCGCTCGTCG GGGACGCCCG GCTGACCTTG AGGGCGCTCA ATGCGCTGGT CCATGACCGC
CTGGCGCAGC GGCCGCGCAG CGGAGCGGAC GGCGCGGCCA TTGCCGCAGC CGCGCGCGCG
GCCAAGCACA AACACTTCCA GCCGCTGGCA GCCTCGCTGG ACCGGCCCAT CAAGCCCGAG
CGCGTGGTGG ATGCGCTGAA CCGCCTGCTG CCCGGCAACG CGATCGTCGT CGCCGATCCC
GGCACGCCTT GCCCGTACTT TTCGGCCTAC TTCAACGCGG CGACACCCGG ACGGCAATTC
ATCACCAACC GGGCGCAAGG GGCGCTCGGA TTCGCAATGT CGGCGGGCAT CGGCGCCGCC
ATCGGCCGAC CCGATTGCGT CGTGGTGTCG GTCATGGGCG ACGGCAGCTT CGGCTTTACC
TGTGGCGAGA TGGAGACCAT GGTGCGGCGC AAGATTCCGG TCAAGATGGT GGTTTTCTCG
AACTGCGTGT TCGGCTGGAT CAAGGCCAGC CAGAAGGCCG GGTACGGTGA GCGCTATTTC
TCGGTGGACT TCGATCGCAC CGACCATGCG CGCGTCGCCG AAGCCTTTGG CCTCAAAGCC
TGGCGCGTGC AAGACCCGGC GCAGCTCGAT GGCGCCATCG AGGCCGCATT GCGGCACGAC
GGGCCGGCGC TGATCGATGT CATCTCACAG GAGTTGCAGG ATGCGGCAAC GCCCGTGAGC
CAATGGATGG GTTGA
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| Protein sequence | MTKMNGAEAM VRMLQLNGVK HIFGLCGDTS LPFYDALARL DHGMEHILTR DERSAAYMAD
AYARVTGKVG VCEGPSGGGA TYLLPGLVEA NESSIAVLGI TSDVPVGSRG KYPLTELDQQ
ALYRPLTKWN ARVDRVDQLP GIVRSAFRAM TTGRPGAAHI CLPHDVQKHE ADAQDIWAQP
GHDRFPAMRY AADPAEIDTA AARLTAAQSP VIMCGGGLVI SGACGELDTL ARLLNAPVVT
TISGQGSLAD THPLNAGVVG ANGGSHATRA ILGNADLVLL IGCRAGSTST EHWTYPSRRI
PVLHLDVDPM AIAANYRTDV ALVGDARLTL RALNALVHDR LAQRPRSGAD GAAIAAAARA
AKHKHFQPLA ASLDRPIKPE RVVDALNRLL PGNAIVVADP GTPCPYFSAY FNAATPGRQF
ITNRAQGALG FAMSAGIGAA IGRPDCVVVS VMGDGSFGFT CGEMETMVRR KIPVKMVVFS
NCVFGWIKAS QKAGYGERYF SVDFDRTDHA RVAEAFGLKA WRVQDPAQLD GAIEAALRHD
GPALIDVISQ ELQDAATPVS QWMG
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