| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0789 |
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| Symbol | |
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| ID | 4694532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 872446 |
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| End bp | 874140 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639848564 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_995587 |
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| Protein GI | 121607780 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000306468 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATCG ACGCACCCCT TGCCAACCCC CGCCGCACGG GCGGCCAGAT CCTGGTCGAT
CAGCTCGTCA CCCACGGCGT CAAGCAGCTT TTTTGCGTGC CCGGTGAAAG CTACCTGGCC
GTGCTCGACG CGTTGCACGA TGCCTGCATT GCCGTCACCG TGTGCCGTCA GGAGGGCGGC
GCCACGATGA TGGCCGAGGC CCAGGGCAAG CTCACGGGCC AACCCGGCAT CTGCTTCGTG
ACGCGCGGGC CGGGGGCGAC CAATGCCTCG GCCGGGGTGC ACATTGCGCA GCAGGATTCG
ACGCCATTGA TCCTGTTCGT CGGCCAGGTG GCGCGCGGCG CGCTGGGGCG CGAGGCGTTT
CAGGAACTGG ACTACCGCGC CGTGTTCGGC ACCATGGCCA AGTGGGTGGT GCAGATCGAC
GACCCGGCCC GCGTGCCCGA GTTGGTCGCG CGCGCGTTCC GCGTTGCCAC CTCGGGCCGC
CCCGGGCCGG TGGTGGTGGC GCTGCCCGAA GACATGCTGA CCGAAGCCGC CACGGTGGCC
GATGCCTTGC CCTGCCAGGT GACCGAAACC CATCCGGGCG CAGCGCAAAT GGCCGAACTG
GCCCAGCGCC TGCAAGCGGC CCGGCAGCCG GTGGCGCTCG TCGGCGGCAG CCGCTGGTCG
GCACAGGCGG TGCGCGAATT CGCCGCGTTT GCTCAGGACT GGTCGCTGCC CGTGTACTGC
TCGTTCCGGC GGCAAATGCT GTTTCCCGCC AATCACGCCT GCTATGGCGG CGATGTGGGC
CTGGGTGCGA ACCCCAGGCT GCTGGCGCGC ATCCGCTCGG CCGACTTGCT GCTGCTGGTG
GGCGGGCGCC TGTCCGAAGT GCCGGCGCAG GGCTATGAAC TGCTGGCCAT CCCCAACCCC
GCGCAGCCGC TGGTCCATGT GCATGCCGAC GCCGGCGAGT TGGGCAAGCT CTACCACCCC
GCGCAGGCGA TACACGCCAC GCCGCAAGCC TTTGCCGCGG CGCTGCAGCG CCTGCGCCCC
CAGGCCGGCG TGCCATGGCA CGCCCATGCC CGGGCGGCCC ATGCCGAGTA CCTGGCCTGG
AGCGACCCGG CAGCGATCCG GATTCCGGGC ATGCTGCAAA TGGGCCAGGT GATGCAGCAC
CTGCGCGCCA CGCTGCCTGC CGACACCCTG CTGTGCAACG GCGCGGGCAA CTTTGCCACC
TGGGTGCACC GTTTCTGGCC GTTCACCAGC TACGCCAGCC AGTTGGCGCC CACCAGCGGC
TCGATGGGCT ATGGCCTGCC CGCCGGCGTC GGCGCCAAGC GCCTGTGGCC TGAGCGCGAG
GTGCTGGTGT TTGCCGGCGA CGGCGACTTT TTGATGCACG GCCAGGAGTT CGCCACGGCC
GTGCAATACG GCCTGCCGAT CATCGTGCTG CTGCTGGACA ACGCGATGTA CGGCACCATC
CGCATGCACC AGGAGCGCGA ATACCCGGGC CGCATCAGCG CCACGCAATT GAAAAACCCC
GATTTCAAGG CCTACGCCCA GGCCTTCGGC GGCCATGGCG AGCGCGTCGA GCGCACCGAA
GACTTCGCCC CCGCGCTGGC CCGCGCCCGC GCCAGCGGCC TGCCCAGCCT GCTGCACTGC
CTGATCGACC CCGAGGCCAT CACGCCCACG GGCACCTTGC AGGGCATTCG CCAGGCGGCG
CTGGCCAAGG GCTGA
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| Protein sequence | MTIDAPLANP RRTGGQILVD QLVTHGVKQL FCVPGESYLA VLDALHDACI AVTVCRQEGG
ATMMAEAQGK LTGQPGICFV TRGPGATNAS AGVHIAQQDS TPLILFVGQV ARGALGREAF
QELDYRAVFG TMAKWVVQID DPARVPELVA RAFRVATSGR PGPVVVALPE DMLTEAATVA
DALPCQVTET HPGAAQMAEL AQRLQAARQP VALVGGSRWS AQAVREFAAF AQDWSLPVYC
SFRRQMLFPA NHACYGGDVG LGANPRLLAR IRSADLLLLV GGRLSEVPAQ GYELLAIPNP
AQPLVHVHAD AGELGKLYHP AQAIHATPQA FAAALQRLRP QAGVPWHAHA RAAHAEYLAW
SDPAAIRIPG MLQMGQVMQH LRATLPADTL LCNGAGNFAT WVHRFWPFTS YASQLAPTSG
SMGYGLPAGV GAKRLWPERE VLVFAGDGDF LMHGQEFATA VQYGLPIIVL LLDNAMYGTI
RMHQEREYPG RISATQLKNP DFKAYAQAFG GHGERVERTE DFAPALARAR ASGLPSLLHC
LIDPEAITPT GTLQGIRQAA LAKG
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