| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0783 |
|---|
| Symbol | |
|---|
| ID | 4693894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 865584 |
|---|
| End bp | 866555 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639848558 |
|---|
| Product | ABC opine/polyamine transporter, periplasmic binding protein |
|---|
| Protein accession | YP_995581 |
|---|
| Protein GI | 121607774 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTCTGA CGGGCTACCC CGGCATCTTT CAGGAAAACT ACACCAAGGC CGTCGTCGAG
CCATTCAGGA AAGCCAACCC GGACATCCAG GTCGAGTTCC ACGCCAGCCC GAACTCGGCG
CAGATGCTCG GCACCCTGCG CGCGCAGGCC GGCGCGCCCC AGATCGACAT CGTCATCATG
GATGTATCGG TGGCCAAGGC GGCCACGGCC GAGGGCCTGC TGGTCCCCAT CGACGAGACG
GTGACCCGGC ATCTCGGCGA TCTCTACCCG CAGGCCAGGG TCGAGGGCGT GAATGCCGTG
GGCGTGACCT TCGACAACCT GGTGCTGCTG CACAACACCG ACAAGGTCAG GCCGGCGCCC
ACTTCCTGGA ACGCGCTGTG GGACGCGCGG TACGCCAGGC AGGTCTCGAT CCCTGCCGTT
CCCGACATCC AGGGCATTGC CCTGACGATC ATCGCCGACA AGATGGCTGG CGGCACCAGC
CATGTCCAAA CGGTCGATGC CGGCATCGCG CGCTTGGCCA AGCTGGCGCC GAATGTGCAG
ACCTGGGACC CCCGACCGGA TGTCTACCAG CCCATCGCCA GCGGCACCGC CGCGATCGGC
ATTGGCTGGA ACGCCAGGGC GCAGGTCTAC GCCGATCTGT CCGCCGGCAA GCTCGGTGTC
GTGTTGCCGC AGGAAGGCAG CGTTTTCCAG ATCAATGTGC TGGGCCTGGT CCACCGGGGG
CCGGCCGGCA AGAGTGCCCG GAAATTCATC GATTACGCGC TCAGCGCGCC AGCACAGGCG
GCTTTCGCCG AGCAGATGTT CTACGCGCCG ACCAACACCC GGGCGGTGCC GCTGATCTCC
AAGGCGGCGC TGCAAAGGAC TGCCGCCGGC GCCATGGACC GGATGATGGC CATCGACTGG
CTGGAGGTGG CCAGGATGCG CGCAGCCATT ACCGAGCAGT GGCGCCGCCG CGTGATCCCG
CTGAGCCGAT AG
|
|---|
| Protein sequence | MVLTGYPGIF QENYTKAVVE PFRKANPDIQ VEFHASPNSA QMLGTLRAQA GAPQIDIVIM
DVSVAKAATA EGLLVPIDET VTRHLGDLYP QARVEGVNAV GVTFDNLVLL HNTDKVRPAP
TSWNALWDAR YARQVSIPAV PDIQGIALTI IADKMAGGTS HVQTVDAGIA RLAKLAPNVQ
TWDPRPDVYQ PIASGTAAIG IGWNARAQVY ADLSAGKLGV VLPQEGSVFQ INVLGLVHRG
PAGKSARKFI DYALSAPAQA AFAEQMFYAP TNTRAVPLIS KAALQRTAAG AMDRMMAIDW
LEVARMRAAI TEQWRRRVIP LSR
|
|---|
| |