Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0780 |
Symbol | |
ID | 4690827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 862457 |
End bp | 863683 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639848555 |
Product | hypothetical protein |
Protein accession | YP_995578 |
Protein GI | 121607771 |
COG category | [S] Function unknown |
COG ID | [COG3748] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0430239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAACT ATCTTCTCGA CTGGGCCAAT CTGCTGCTGC GCTGGGTCCA TGTCATCACC GCGACGGCCT GGATCGGCGC GTCGTTCTAC TTCGTCTTTC TCGACAGCAG CCTCACGCCG CCCGTCGATG AGGCGCTGAA AAAACAGGGC GTCAGCGGCG AACTCTGGGC CGTGCACGGT GGCGGCTTCT ACCACCCGGT CAAGTTCGCA GTCGCGCCCG CGCAACTGCC CGAGCGCCTG CACTGGTTCT TTTGGGAGAG CTACGGCACC TGGATCAGCG GCTTTGCGCT GTTTGCGCTG TCGTACCTGT ACAGCGCCCG CACTTACCTG ATCGACCAGT CGCGCGTCGA CTGGGAGCCG GCCACGGCCA TCGGGGTGGC GCTGGCGTTT CTGGTGCTGT TTTGGTTGTT CTACGACGCC ATCTGCCGCT TCTTCGGGCC GAAGAAGAAC GCCGACGCCA TCGTCGGCGC GCTGGTGTGC CTGCTGGTGG GGCTGGCCTC CTGGCTGGCC TGCCGCTGGT TTGCGGGGCG GGCGGCTTTT GTGCTGGTGG GCGCGATGAT GGCCACGGCC ATGAGTGCCA ATGTGTTCTT TTGGATCATC CCCGGCCAAC GCCGCGTGCT GGCGCAGATC AGGGCCGGCC AGCCGGTAGA CCCGGTGCAC GGCCAGCGCG GCAAGCAGCG CAGCGTGCAC AACACCTACT TCACGCTGCC GGTGCTGTTG GCGATGCTGA GCAACCACTA CAGCTTTACC TGGAGCCATC CGCACAACGC CTGGGTGCTG ATCCTGATGA TGTTCGCCGG CGCGGCCATA CGCCAGTTCT TTGTGCTGCG CCATGGCCAC CGGCTGGGCC GCAACGGCAA CCCGCTGCCC TATGCGTTGC TGGGGGTGGC GGTGATCGCG GGCGTGATCG TCTGGATCAG GCCCGCGCCG CAGGCGGTTC CTGCCCTGGT TTCAGCCGCT GTGGGCGAGG CCGGCGCCGG CGGGCCCAAT GACTATGCGT CGGTGCAACA GGTGTTGGCG CAGCGCTGCT ACCTCTGCCA TGGCGCGCAG TTGCAGATGA AGAACCTGCG CCTGGATTGG GCCGCCAGCG TCAGGCAACA TGCACAGGCC ATCTACCAGC AGACGGTGGC GCAAAAGCTG ATGCCGATGA ACAACGCCAC CGGCATGACC GAGGCCGAGC GGGCGCTGAT CGGCCGCTGG TTCGAGGCCG GTGCGCCCAT GCCCTGA
|
Protein sequence | MENYLLDWAN LLLRWVHVIT ATAWIGASFY FVFLDSSLTP PVDEALKKQG VSGELWAVHG GGFYHPVKFA VAPAQLPERL HWFFWESYGT WISGFALFAL SYLYSARTYL IDQSRVDWEP ATAIGVALAF LVLFWLFYDA ICRFFGPKKN ADAIVGALVC LLVGLASWLA CRWFAGRAAF VLVGAMMATA MSANVFFWII PGQRRVLAQI RAGQPVDPVH GQRGKQRSVH NTYFTLPVLL AMLSNHYSFT WSHPHNAWVL ILMMFAGAAI RQFFVLRHGH RLGRNGNPLP YALLGVAVIA GVIVWIRPAP QAVPALVSAA VGEAGAGGPN DYASVQQVLA QRCYLCHGAQ LQMKNLRLDW AASVRQHAQA IYQQTVAQKL MPMNNATGMT EAERALIGRW FEAGAPMP
|
| |