| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0772 |
|---|
| Symbol | |
|---|
| ID | 4693297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 851991 |
|---|
| End bp | 853385 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639848547 |
|---|
| Product | major facilitator superfamily transporter |
|---|
| Protein accession | YP_995570 |
|---|
| Protein GI | 121607763 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA CTCGAGTAAA TACTGTCCCC GGAAAACCAA TCGTCGGAAT TCCACTTCTA
TTACTGTGCG CCGCCAATTT CATCGATGGA ATGGATGTCT CGACGATAGG GGTGACCTTG
CCTGCCATTC AGAAGGGGTT GAATATTTCT CCAACCCTGT CGCAATGGGC CGTGAGTGCT
TACGTCCTGG GTTTTGGCGG TTTCTTGCTC CTGGGCGGGC GCGTGGCCGA CATCTTTGGT
CATCGCCGTG TTTTCATTTC GGCATTGCTC GTCTTCACTC TGGCCAGCAT TGCGGGCGGC
TTCGTCACGG ATGGGCCCAC CCTGATTGCC ACCAGGCTGA TCAAAGGGAT TGCCGCAGCA
TTCACGACGC CGGCAGCGGT GGCTCTTTTG CTTTCGAGTT ATAGCGATAG CGTCGATCGG
GCGAAGGCAT TGGGCATATT TGCGTCCACC AGCGCGACCG GCTTTGTGCT GGGCATGCTG
CTCGGCGGCG CGATCACGAC GCTGAACTGG CGGCTGACGA TGGCGATGGG CGCGCCCGTT
ACGCTGCTCG TCCTGCTGAT GGCGCCATTT TTCTTTCCGG TCGATACACT GCGCACCGGG
AAAAACGAAC GATTCGACTG GATTGGCGCC TCCACGATTA CGGCCGGCCT GGTTTCGTTT
GTATTCGGTG TCACCAATGC GGCGGACCAC GGTTGGTCGG ACAGCATGGC GTGGGGGCCG
ATCGTGGCAT CTCTGGTTTT GCTGATCGCC TTTTTCGTCG TCGAGAAAAA GCATGAGGCA
CCGATGGTTC CGCTGGGCAT TTTCCGGCGT GCCAAGCTGA GCAATGCGCT GATGACGGTT
GCGATATTTC AGGGCGCGTA CATCGGATTT CAGTTCGTGG CCACGCTGTA CTACCAACAG
TCCGTTGGCT GGTCTGCTTT CTCCACCGGC TTCGCCTTCG TGCTGATCGG CATGTTTGTG
ATGTTCCTGT CCCCGCGCTT CTCGGCCATG GCCCAGAAAC GCGGCGCCAC CGGCTTGATA
GCGCTGGGCA TGGCGCTCCA GGTCGTGGCT TACACCTTCT GGACGCTCGC CAACGGGCAT
CTGTCGCCGG TTGTGTTGGC CTTCCTGGTG CAAATTCCGC TCGGCTTGGG ATATGCCATG
GTCTTTCCAT CCGTTCAGAT TGCGGCGCTC GGTGACATCG AAGAAGACAA GGCGGGACTT
GCCACGGGCC TGTTTTTCTC CGCGTTCCAG ATTGGCGGCG GCGTCATACT GGGCCTGACA
TCCAGTATTT TCGGCAGCTC TGCACATTAT GGCTGGAACC CTTATCTGTG GGGTAGCGCC
TTCTCGGCGG TTTTGGCTCT GTTGACGATA CTGGTCGCTG CATCGGGTCC AAGAAGGAAA
TCGGCGCGGG CTTGA
|
|---|
| Protein sequence | MTETRVNTVP GKPIVGIPLL LLCAANFIDG MDVSTIGVTL PAIQKGLNIS PTLSQWAVSA
YVLGFGGFLL LGGRVADIFG HRRVFISALL VFTLASIAGG FVTDGPTLIA TRLIKGIAAA
FTTPAAVALL LSSYSDSVDR AKALGIFAST SATGFVLGML LGGAITTLNW RLTMAMGAPV
TLLVLLMAPF FFPVDTLRTG KNERFDWIGA STITAGLVSF VFGVTNAADH GWSDSMAWGP
IVASLVLLIA FFVVEKKHEA PMVPLGIFRR AKLSNALMTV AIFQGAYIGF QFVATLYYQQ
SVGWSAFSTG FAFVLIGMFV MFLSPRFSAM AQKRGATGLI ALGMALQVVA YTFWTLANGH
LSPVVLAFLV QIPLGLGYAM VFPSVQIAAL GDIEEDKAGL ATGLFFSAFQ IGGGVILGLT
SSIFGSSAHY GWNPYLWGSA FSAVLALLTI LVAASGPRRK SARA
|
|---|
| |