| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0730 |
|---|
| Symbol | |
|---|
| ID | 4693500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 803928 |
|---|
| End bp | 805487 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639848507 |
|---|
| Product | benzoate-CoA ligase family |
|---|
| Protein accession | YP_995530 |
|---|
| Protein GI | 121607723 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGT TGCCGCAGCG CTTCAATTTT GCCGCCCATT TGTTCGCCTC GAACCGCGCA
CGCGCCGAAC GCACGGCCTA CATCGACGAC CAGGGGCGGC TGAGCTATGG CGCGCTCGAA
GACGCCGCCC GGCGTCTGGC GACCTGGCTG CTCGATGCGG GGCTGCGCCG CGAGGAACGG
GTGCTGCTGC TGATGCTCGA CACCCGCGAT TGGCCCGTGG CCTTCCTGGG CTGCCTGTAT
GCCGGGGTGC AGCCGGTGGC GGTCAACACC GTGCTCAAGG CCGATGACTA TGCCCATATG
CTGGGCCACT GCCGGGCGCA GGCCGTGCTG GTGTCGGGGG CCTTGTTGCC GGTGCTGGGC
CAGGCCATGG AGCGCCAGCC GAACGAAGTC CGCCGGCTGA TCGTGTCGCA GCCCACGGGG
GCGCTGCCAG CACAGGCGCT GGACATGCAG GCCGCCGTGG CCGGCAGTCC TGCGCTGGCG
GCGCCAGCGG ACACCGGCGC GGACGAGCCA GGCTTTTGGC TGTATTCCTC GGGCTCCACC
GGCAAACCCA AGGGCACGGT GCACAGCCAT GGCAACCTGT GGTGGACGGC GCAGCTCTAC
GGCAAGGCGG TGCTGGGCTT GACGGACGAG GATGTCTGCT TTTCTGCCGC CAAGCTCTAC
TTTGGCTATG GCCTGGGCAA CAGCCTGACG TTCCCGTTGT CGGTAGGGGC CAGCGTGGTG
CTGATGGCCG AGCGCCCGAC CCCCGAGGCC TGCTTTGAAC GCTGGACCCG GCACCAGCCC
ACGGTATTTT TCGGCGCCCC CACCGGCTAT GCCGGCATGC TCGCATCGCC CCGGCTGCCG
CAGCGCCAGG CGGTGGCGCT GCGCATCTGC TCCTCGGCGG GAGAGGCCCT GCCGGCCGAG
ATCGCGCGGC GCTTCAAGGC CCACTTCGGC TGCGACATCA TCGATGGCAT AGGCTCCACG
GAAATGCTGC ACATCTACTT GTCCAACCGC CCCGGGGATG TGCGCTATGG CACCACGGGC
AAGCCGGTGG CCGGCTACGA CATTGCGCTG CGCGGCGAAG ACGGGCGCGA GGTGCCCGAT
GGCGCGATTG GCGACTTGTA CGTCCAGGGC CCCAGTGCCG CGCTGATGTA CTGGAACGAG
CGCGACAAGA GCCGCGAGAC TTTTCAGGGG GTCTGGACCA AGAGTGGCGA CAAGTACCTG
CGCGACGCCG AAGGCTATTA CACCTACGCC GGGCGCAGCG ACGACATGCT CAAAGTCAGC
GGCATCTATG TCTCGCCTTT CGAGGTCGAG GCCACCCTGA TGCAACATGC TGCGGTTCTG
GAGGCGGCGG TGATCGGCAA GCAGGATGCG GACGGTCTGA CCAAACCCAT GGCCTTCGTC
GTGCTCAAGG ACGGCCAGTC GGCCACGCAA GACGAGCTCA AGGCCTTTGT CAAGGAGCGC
CTGGCGCCGT ACAAATACCC CCGCTTCGTC GAGTTCGTGG CCGAGTTGCC CAAGACCGCC
ACCGGAAAGA TCCAGCGCTT TCGGCTGCGC GAAAAGCAGT TGCCGCAGTC GCCTGTCTGA
|
|---|
| Protein sequence | MTQLPQRFNF AAHLFASNRA RAERTAYIDD QGRLSYGALE DAARRLATWL LDAGLRREER
VLLLMLDTRD WPVAFLGCLY AGVQPVAVNT VLKADDYAHM LGHCRAQAVL VSGALLPVLG
QAMERQPNEV RRLIVSQPTG ALPAQALDMQ AAVAGSPALA APADTGADEP GFWLYSSGST
GKPKGTVHSH GNLWWTAQLY GKAVLGLTDE DVCFSAAKLY FGYGLGNSLT FPLSVGASVV
LMAERPTPEA CFERWTRHQP TVFFGAPTGY AGMLASPRLP QRQAVALRIC SSAGEALPAE
IARRFKAHFG CDIIDGIGST EMLHIYLSNR PGDVRYGTTG KPVAGYDIAL RGEDGREVPD
GAIGDLYVQG PSAALMYWNE RDKSRETFQG VWTKSGDKYL RDAEGYYTYA GRSDDMLKVS
GIYVSPFEVE ATLMQHAAVL EAAVIGKQDA DGLTKPMAFV VLKDGQSATQ DELKAFVKER
LAPYKYPRFV EFVAELPKTA TGKIQRFRLR EKQLPQSPV
|
|---|
| |