| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0723 |
|---|
| Symbol | |
|---|
| ID | 4695227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 798603 |
|---|
| End bp | 799433 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639848500 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_995523 |
|---|
| Protein GI | 121607716 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.527134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TTCCCGCTGT CGCTTCGGTC GCTGCTCTTT TCATTCTCGG GATGGGGGCC
GCAAACGCCC AGGCCTGCAA GTCGCCGGTG CCCGACGCCG CGCTGGTGAA GAAGGGCACG
CTGATCATGT CGGTCAACCC GACCCTGCCG CCGATGCAGT TCGTCGACCA GACCGGTGCG
CTCAAGGGCA TGCGGGTCGA ACTGGGCGAG GCCATCGCCA AGCGCCTGTG CCTCACGCCC
GAGTACGTGC GCATCGAGTT CTCGGCCATG ATCCCGGGCC TGCAGGCCGG TCGCTGGGAC
ATCATCAACA CCGGCATCTT CTACACCGAC GAGCGCGCCA AGCTCATGCA GATGCTGCCT
TACGAAGACC AGGCCATCAG CATCAGCACT GCCAGGGGCA ACCCGCTGAA GATCAACAAG
CCCGAGGACC TGTCGGGCAA GAGCATCGGC GTGGAGATCG GCGGCTTCGA AGAGCGCAAG
GCGCGCGAAC TCGACAAGCA ACTGACCGAC AAGGGCCTCA AGGGCATGAC CATCCGCACC
TTCGAGAACT TCGCGATGGC CTTCCAGTCG CTGCGCGCCG GCCAGGTCGA GGTGGCGCTG
TCGATCGACT CCACCGGTGC CGAATACCAA AAGCGCGGCG ACTTCGACCG TGTGCTGCAC
GGCCTGTTCC CCACGCCGGT GGCGTTGGCC GCCAAGAACA AGGAACTGTC GATCGCGGTG
GCCAAGGTGC TCAACGACAT GAAGGCCGAC GGTTCCCTCA ACAAGCTGCT CGACCAGTAC
GGCGTGAAGG CGACCGACGG CACCGTGCTC GTCAAGGGAC CGGCGAGCTG A
|
|---|
| Protein sequence | MKLLPAVASV AALFILGMGA ANAQACKSPV PDAALVKKGT LIMSVNPTLP PMQFVDQTGA
LKGMRVELGE AIAKRLCLTP EYVRIEFSAM IPGLQAGRWD IINTGIFYTD ERAKLMQMLP
YEDQAISIST ARGNPLKINK PEDLSGKSIG VEIGGFEERK ARELDKQLTD KGLKGMTIRT
FENFAMAFQS LRAGQVEVAL SIDSTGAEYQ KRGDFDRVLH GLFPTPVALA AKNKELSIAV
AKVLNDMKAD GSLNKLLDQY GVKATDGTVL VKGPAS
|
|---|
| |