| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0688 |
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| Symbol | |
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| ID | 4694934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 767373 |
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| End bp | 769109 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639848465 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_995488 |
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| Protein GI | 121607681 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0831226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAG ACCTGCTTTC AGCCCCCGCC GACCTGCAAC CGCAGGATGC CCCCCTGCCC
CGCCCGCGCA TCGGCGAGTT GCTGGTGCAA TCGGGCAAGC TCAGCGCCCG CGACCTGGAG
CGCGCGCTGT CCGCGCAGCA GGAAATGGGG GGCCTGCTCG GGCGCGTGTT CGTGCGCCTG
GGGCTGGTGT CGGACGCGGA TGTGGCGCAA GCGCTGTCGG CGCAACTGGG CATCCCCTTG
GTGTCCGAGC ATGACTTTCC CGATCTGCTG CCCGAAGTCG AGGGCCTGCG CCCCGAGTTC
CTGGCGGCCA ACAATGTCTG CCCGCTGCGC CTCGAAGGCG ACCAATTGCA TGTCGCGATG
GCGGTGCCGC AGGATGCCTT CGTCGTCAAG GCCCTGCATC TGGCGACCGG CCATGCCATC
GTGCCGTATC TGGCGCTGGA AAGCGCGATC GACAAAGCGC TGGCCGAGCC GGCCAACGCC
GTGCCGCAGC CCCAGGACGA CGGCTTCGGC GATGGCCTCG ATGGCAGCGA TTTCGTCGAG
CATCTGAAAG ATCTGGCCAG CGAGGCGCCG GTCATCCGCC TGGTCAACAC CATCATTGGC
CGGGTCATCG ATCTGCGCGC TTCCGACATC CACCTGGAGC CTTTCGACGA TGGCCTGCAT
GTGCGCTACC GCATCGACGG GGTGATCCAT CCCGGCGAAC TGGTGCCGCC GCGCCTGAGC
GCTGCCGTCA ATTCGCGCGT CAAGCTGTTG GCGCATCTGG ACATTGCCGA GCGCCGCTTG
CCGCAAGACG GGCGCATCAA GACCCGCCTC AAGGGGCGCG AACTGGATCT GCGCGTCTCC
ACCGTGCCCA CCGTGCACGG CGAAAGCGTG GTCATGCGCG TGCTCGACCG CGCCAGTGTC
CGCCTCGAAC TCGAGAGCAT GGGCTTCGAG CCGGACACGC TGGCGCGCCT GGCCACGCTG
CTGGCCCGCC CGCACGGCAT TTTGCTGGTC ACCGGCCCCA CCGGCTCGGG CAAGACCACC
ACGCTGTACG CCGCGTTGAC CAAGATCGAT GCCGGCGAGC AAAAAATCAT CACGGTCGAA
GACCCGGTGG AGTACCAGCT CGCGGGCATC AACCAGATTC AGGTGCACAC GCAGATCGAT
CTGACCTTTG CCAATGCGCT GCGCTCCATC CTGCGGCAAG ACCCGGACAT CATCATGATC
GGCGAAATGC GCGATGGCGA GACCGCGCAG ATCGCCGTGC AATCGGCGCT CACCGGCCAC
CTCGTGCTCT CGACCTTGCA CACCAACACC GCCGCCGGCG CGGTGGTCCG GATGCAGGAC
ATGGGGGTCG AGCCCTACCT GATCACCTCC GCCGTCAATG GCGTGCTGTC CCAACGGCTG
GTGCGCACGC TGTGCGAGCA TTGCAAGCAG GCCCATGACC CCGGGCCCGA GATACGCCAG
CGCACAGGTC TGGCGCGCTT TTGCGCGGCG GGCCAACCGG TGTACCGGGC CGTGGGCTGC
GAGCATTGCC GCCAGTCGGG CTACCGTGGC CGCACCGGCA TCCATGAACT GCTGCTGCTC
GACGATTCCC TGCGCCGCGC GATCATCGAA GGGCGCGATG CGAACATCCT GCACGCGATG
GCCGTGCAGG GCGGCATGCT GAGCCTGTAC GAGGATGGCC TGCGCAAGGT GGCCGCCGGC
CGCACCACGC TGGACGAATT GGCCCGGGTG ACGCAGGACG ACCCGTCCGA TGCCTGA
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| Protein sequence | MTTDLLSAPA DLQPQDAPLP RPRIGELLVQ SGKLSARDLE RALSAQQEMG GLLGRVFVRL
GLVSDADVAQ ALSAQLGIPL VSEHDFPDLL PEVEGLRPEF LAANNVCPLR LEGDQLHVAM
AVPQDAFVVK ALHLATGHAI VPYLALESAI DKALAEPANA VPQPQDDGFG DGLDGSDFVE
HLKDLASEAP VIRLVNTIIG RVIDLRASDI HLEPFDDGLH VRYRIDGVIH PGELVPPRLS
AAVNSRVKLL AHLDIAERRL PQDGRIKTRL KGRELDLRVS TVPTVHGESV VMRVLDRASV
RLELESMGFE PDTLARLATL LARPHGILLV TGPTGSGKTT TLYAALTKID AGEQKIITVE
DPVEYQLAGI NQIQVHTQID LTFANALRSI LRQDPDIIMI GEMRDGETAQ IAVQSALTGH
LVLSTLHTNT AAGAVVRMQD MGVEPYLITS AVNGVLSQRL VRTLCEHCKQ AHDPGPEIRQ
RTGLARFCAA GQPVYRAVGC EHCRQSGYRG RTGIHELLLL DDSLRRAIIE GRDANILHAM
AVQGGMLSLY EDGLRKVAAG RTTLDELARV TQDDPSDA
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