Gene Veis_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0673 
Symbol 
ID4694908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp752327 
End bp753565 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content65% 
IMG OID639848450 
ProductABC transporter related 
Protein accessionYP_995473 
Protein GI121607666 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00619068 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000755206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGGTT CTTGCGATGG CGGTGGCAAT GGTGTTGGCA ATGGTGTTGG CGATGTGGTG 
CTGCGGGTGC AGGGCCTGTC CAAGGAGTAT CGCCTCTATG CCTCGCCCCG TGAGCGCTTC
AAGGCGCTGT TTGGCAGCCG GGCCAGGCAT CACAGCCACT GGGCTTTGCG CGATGTTTCG
TTTGAATTGC GCCGTGGGCA GTGTTTGGGC GTGGTGGGTG ACAATGGGGC GGGCAAGAGC
TCGCTGCTGA AGTTGCTGGC GGGCACCTTG CAGCCCAGCG CCGGCCGCAT CGAGCGCCAG
GGGCGGGTGA CTGCCATTTT GGAGTTGGGC GCCGGGTTTC ATCCCGACTT CAGCGGGCGT
GACAATCTGT ATTTTGGCGG CAGTCTGATC GGCATCAGCC ATGCCGCGAT GGCGCGCCTG
GAGTCTGCCA TCGTGGCGTT TTCGGAACTG GGGGAGGCGC TCGATCGTCC GGTGAAAACC
TATTCCTCGG GCATGACGGT GCGGCTGGCA TTCGCGTTGG TGACGGCCAT TCAGCCCGAT
GTGCTGATCA TCGATGAGGC GCTGGCGGTG GGCGATCAGC ATTTCCAGAA AAAATGCGTG
GCGCGCATCA CGCAGTTTCG TGAACGCGGC TGCGCCATCC TGTTTTGCTC GCACAGCCCG
TACCACGTCC GCAGCCTGTG CGACCGCGCC CTGTGGCTGG CCGCAGGCAG CGTGCGCGCT
TTGGGCGCGA CCGAGCCGGT GCTGGGGGCC TACGAGATGC ATTCACGCCT GCGCTCGGCG
CCCGCCGCGC CCGTGGGCAC ATCGGCGCCG CAGGGCTTGT CACCAGCGCC CGATGATGGC
GGCGCCAGAA TACTGTCGCT GACGCTGGCC GATCTTGGCC CGGGCGAGCC GGCCTTGCTC
GAACACGCCG ATCTGGTCGC CACCATCGTG GTGCGCGGGC GTGGCGACGA ACAGCCGAAC
ATAGGGTTCA TGATCGAGCA GTCCAGAGGC TCCGGCATCA CTTCGCTGGC CACCCATGAG
GAGGGTGCCG CACCCGTGCG GCAAGCCGAT GGTAGCTGGC GCTCGGTGCT GACCTTTCCG
GCCTTGCCGC TGCACAGCGG GGAGTATGTG GTCAGCGCGT TCTTGTTCGA TGCCAGCGGC
CTGGTGGTTT ATGACCAGTG GTTGCAGCAT CTGCACTTTC GCTTTGTCTC GCCGACGCTG
ATGCCGGGTC TCGTGCGGCT GCCGCACCGG TGGTCTTGA
 
Protein sequence
MTGSCDGGGN GVGNGVGDVV LRVQGLSKEY RLYASPRERF KALFGSRARH HSHWALRDVS 
FELRRGQCLG VVGDNGAGKS SLLKLLAGTL QPSAGRIERQ GRVTAILELG AGFHPDFSGR
DNLYFGGSLI GISHAAMARL ESAIVAFSEL GEALDRPVKT YSSGMTVRLA FALVTAIQPD
VLIIDEALAV GDQHFQKKCV ARITQFRERG CAILFCSHSP YHVRSLCDRA LWLAAGSVRA
LGATEPVLGA YEMHSRLRSA PAAPVGTSAP QGLSPAPDDG GARILSLTLA DLGPGEPALL
EHADLVATIV VRGRGDEQPN IGFMIEQSRG SGITSLATHE EGAAPVRQAD GSWRSVLTFP
ALPLHSGEYV VSAFLFDASG LVVYDQWLQH LHFRFVSPTL MPGLVRLPHR WS