| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0657 |
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| Symbol | prfC |
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| ID | 4695203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 736409 |
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| End bp | 738031 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639848434 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_995458 |
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| Protein GI | 121607651 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0802538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTACG CCCCAGAAAC CCGGCGCCGC CGCACCTTTG CCATCATCTC CCACCCCGAT
GCGGGCAAGA CCACGCTGAC CGAAAAGCTG TTGCTGTTTT CCGGCGCAAT ACAGATCGCG
GGGGCCGTCA AGGGGCGCAA GGCCAGCCGC CACGCCACAT CCGACTGGAT GGAAATCGAA
AAGCAGCGCG GCATCTCGGT GGCCTCGTCG GTGATGCAGA TGCTGTACCG CGAGCATGTG
ATCAACCTGC TCGACACCCC CGGCCACAAG GACTTTTCGG AAGACACCTA CCGCGTGCTG
ACCGCCGTGG ACTCGGCCCT GATGGTGATC GACGCGGCCA ACGGCGTGGA AGCGCAGACC
CGGCGCCTGA TCGAAGTCTG TCGCCAGCGC AACACCCCCA TCATCAGCTT CGTCAACAAG
ATGGACCGCG AGGTGCGCGA CCCGCTGGAC ATCCTGGACG AGGTCGAGCG CGAACTGGGC
ATGCCCTGCT GCCCGATGAC CTGGCCGGTA GGCCAGGGCA AGGGCTTTGG CGGCATCATC
GACCTGCGCA GCCAAACCAT GACCGTGTTC GAGCCTGGCA GCCAGCGCCG CCCGCAGGAC
TTCGAGGCGA TTGCGCTGAG CGCTGCCGAC CGGTTGCGCC AGCGCTTTGG CGCCGCCTTC
GACGCTGCGC TCGACAGCAT GGAACTGGCC GCCGGCGCAT CGCCCGCATG GGACCCGGCG
GCCTTTCTGG CCGGCAAGCT CACACCCGTG TTCTTCGGCT CGGGGGTGAA CAACTTCGGG
GTGCTGGAAG TGCTCGACGC GCTGGTGGAC ATGGCACCGC CGCCCGGTGC GCGCATCAGC
ACGCTGGGGG CCGGCGAGCA TGCGGTGGTG CGGACCATCC AACCGGAAGA GGAAGGCTTC
TCGGGGGTGG TGTTCAAGGT GCAGGCCAAT ATGGACGCCA ACCACCGCGA CCGCATCGCC
TTTGTGCGCG TGGCCTCGGG CAAATACCTG CCGGGCATGA AGCTGAAGGT CCAACGCACG
GCCAAAGAAC TGCGCCCGAC CTCGGTGGTC ACCTTCATGA GCCAGCGCCG CGAAGCCGTC
CAAGAGGCAT ACGCCGGCGA CATCATCGGC TTTACCACGC ATGGCGGCGT GCAATTGGGC
GACACCATCA CCGATGGCGC GAACTTGCAA TTCACCGGCC TGCCGTTCTT CGCGCCCGAG
ATGTTCATGA CCGTGGTGCT GAAAAACCCG CTGCGCACCA AGCAGTTGCA ACAGGGCCTG
GCCCAGTTGG GCGAAGAGGG CGCGATACAG GTCTTCAGGC CCGATGCCGG CGGCAACATG
CTGCTCGGCG CCGTGGGCCA GTTGCAGTTC GAGGTGGTGC AGCACCGGCT GAAGGCCGAA
TACGACGCCG ACATGCGCCT GGAGACCTGC CAATACACCG GCGCGCGCTG GATCACGGCC
GACAGCCCGG CCGAACTGCG CGCCTTCACC GACGCCTACC CGCAGCGCAT GGCGCATGAT
GCGGCCGACA CGCTGGCCTA CCTGTGCACC AGCCCGTATG ACGTGCGGCT GGCGCAAGAG
CGCTTTGCCG CCATCCATTT CCACCCGCTG CGCGAACACG CCGGCCTGGC GCTGATGAAG
TGA
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| Protein sequence | MSYAPETRRR RTFAIISHPD AGKTTLTEKL LLFSGAIQIA GAVKGRKASR HATSDWMEIE
KQRGISVASS VMQMLYREHV INLLDTPGHK DFSEDTYRVL TAVDSALMVI DAANGVEAQT
RRLIEVCRQR NTPIISFVNK MDREVRDPLD ILDEVERELG MPCCPMTWPV GQGKGFGGII
DLRSQTMTVF EPGSQRRPQD FEAIALSAAD RLRQRFGAAF DAALDSMELA AGASPAWDPA
AFLAGKLTPV FFGSGVNNFG VLEVLDALVD MAPPPGARIS TLGAGEHAVV RTIQPEEEGF
SGVVFKVQAN MDANHRDRIA FVRVASGKYL PGMKLKVQRT AKELRPTSVV TFMSQRREAV
QEAYAGDIIG FTTHGGVQLG DTITDGANLQ FTGLPFFAPE MFMTVVLKNP LRTKQLQQGL
AQLGEEGAIQ VFRPDAGGNM LLGAVGQLQF EVVQHRLKAE YDADMRLETC QYTGARWITA
DSPAELRAFT DAYPQRMAHD AADTLAYLCT SPYDVRLAQE RFAAIHFHPL REHAGLALMK
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