| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0640 |
|---|
| Symbol | |
|---|
| ID | 4691999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 715347 |
|---|
| End bp | 716372 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639848417 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_995441 |
|---|
| Protein GI | 121607634 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.674011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATC GACTGGACGA CCCCCATGCC GCCTCGCGGC TGATGAACCG GCTTCGGTTG
AAGCACTGGG CGCTGCTCGC TGCACTGTCG GACATGCCCG TGCTTGCGCA GGCAGCGTCA
GCCGTGAGCG TCACGCAGCC ATCTGCCACC AAGATGCTTG CGGACATCGA ACTCGCATTC
AATTTCCAGC TTTTCGAACG CCACTCGCGC GGGCTGCGGC CCACGCCGCT GGGCGAAGAA
GTCGTTGCGT TCGCGCGCCA GTCCCAGGCC GGCCTCGCAC GCTTTCTGGA AGGGCTGGAA
ATCAAGCGAC GGGGTGGGCA CGGCCAGCTC GTGATCGGCG CCATCATGGG CGCGGCTCCG
GATCTGGTCG CTCGCGCCGT TGCGGAGATC AAGCGCGAGA GGCCCCTCCT GAACGTCCGC
ATACTGGGTG AAACGAGCGA TCAGGTGGGG ACGCTGCTCG AGCGCCATGC GATTGAATTT
GCTGTCGGTC GGTTCTCGTC GCTCATGCAG CACAACATGT TTGCTTTCGC GCCGTTGGCC
AACGAAACGA TGCAGGTCGT GGTCCGCCGT GCGCATCCAT GCGCCCGGCA GCGCGCACTG
ACGCTCGCGG GGCTCACGGT ATGGCCCTGG ATCCTTCAGC CCTTGACCAG CCCGGCGCGG
CAACTGATGG AGGAAGAATT TACAGCGGTC GGCCAAAGCA CCCCGGCCAA TCTCGTCGAG
TGCGCTTCAA TATTCGCGAC GCTGCAGCTA CTCCAGGCCA GCGACGCAGT GGGCGTGTTG
CCGGAATCCG TTGTCAGAGA TCACGTACGG GCCAAGTTGC TGCGCGTGCT TCCTGTGGCC
ATCGGGAAAG ACTTGAAAGG GTTTGGCGTT CTGACGCGGA TCGGAGAGCC ACTTTCCGAG
ACTGCCGCCA CCTTCATCGC CCACCTTCGA CGCTATGCCG GCGTCACTTT GCCGCCCCTG
CCCGAGCCGA ACCCGGGACG CGCTTCTTCG GCGTCGAAGC TGCCGCCTTC TTCGTCGCGG
CCTTGA
|
|---|
| Protein sequence | MEYRLDDPHA ASRLMNRLRL KHWALLAALS DMPVLAQAAS AVSVTQPSAT KMLADIELAF
NFQLFERHSR GLRPTPLGEE VVAFARQSQA GLARFLEGLE IKRRGGHGQL VIGAIMGAAP
DLVARAVAEI KRERPLLNVR ILGETSDQVG TLLERHAIEF AVGRFSSLMQ HNMFAFAPLA
NETMQVVVRR AHPCARQRAL TLAGLTVWPW ILQPLTSPAR QLMEEEFTAV GQSTPANLVE
CASIFATLQL LQASDAVGVL PESVVRDHVR AKLLRVLPVA IGKDLKGFGV LTRIGEPLSE
TAATFIAHLR RYAGVTLPPL PEPNPGRASS ASKLPPSSSR P
|
|---|
| |