| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0610 |
|---|
| Symbol | |
|---|
| ID | 4691528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 677810 |
|---|
| End bp | 679753 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639848387 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_995411 |
|---|
| Protein GI | 121607604 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCA ACCCGCTTCG GATCGCCGTG CCGGGCCTGG CCCTGCTGGC TGCCATGCCG
CTGTTCATCG GCAACCCGTA CTACATCCAC ATGATCGGCA CGATCATGAT TTACGCCATC
TTGCTGTTCG GGCTGGACAT CGTGGTCGGC TATACCGGGC AGGTGTCGCT CGGGCATGCC
GGGCTGTTCG GCGTCGGTGC GTACACGGCG GGGGTGCTGT TTCTCAAGCT CGGCGCGCCG
CTGTGGCTGA TCATGGTGGC CTGCATCGGT GTCACGGCAG TGTTTGGCGC GTTGCTGGCG
CTGCCGGCCT TGCGCGTCTC GGGGCCGTAC CTGGCGATGG TGACGCTGGC TTTCGGCACC
ATCATCCAGA TTCTGATCAA CGAGATGGGC TTTTTGACCG AAGGCCCGCT GGGCATCAAG
ATACCCAAGC CTTCGATCGC CGGCATGAAG CTCGACGACA ACGGTTTTTA CTGGCTGGTG
CTGGCGCTGA TGGCGCTGGC GCTGCTGGTG GTCGACCGCA TTTTGCGCTC GCACTATGGC
CGCGCCTTCG AGGCCCTGCG CGGCAGCCCG GTGGCGTCGG ACTGCATGGG CGTCTCGGTC
TACCGCTACA AGGTCTACGC CTTTGTGATC AGTGCCGGGT TTGCCGGCCT GGCAGGCGGG
CTGTATGCGT ATTCCGAGCA GTACATCTCG CCCAATACCT ACAACTTCGA GCTCACGGTG
CTGTTCTTGC TGGCCGTCAT CATGGGAGGG CGCAAGACGC GCTCGGGCGC CTTGCTGGGC
GCGGCCATCA TCGTGATCTT GCCCAAACTG CTCGACGACC TGGAACTGTT TCGCATCGTC
GCCAGCGTGC TGGCGCTGCT GATGGCGCTG GGCGCGGCGC TGGGCCTGGC GCGCAAGGTC
GTCACGCCCC GCGCGGTCAT CGTTCCGGTG GCGGGCACGG TGGCGCTGGC CGGGTTTTCG
TTCTGGCTAC AGTCGATCAC CGATTGGCGC CTGACCATCT TCGGCCTGAT GATTTTGTTC
GTCGTCTATT ACCTGCAAGA CGGCATCGTC GGTTTTGTGC GCAGCCAGTG GCTGCGCAGC
GCCCGGCGCT CGCAGACCGG CGGGCGGCAG ACCCCGCGCG AGGACGCCGT CCTGTCGGGG
CCCGGCCCAT CCAGCGGCAA CGGCAATGAC GACGATGGCG GCGACCTGCT GGTGGCCAAG
GACGTGCTGA TGCAGTTTGG CGGCCTCAAG GCCCTGAACC AGGTGGACCT GACCGTCAAG
CGCGGCAGCA TTCACGGCCT GATCGGCCCC AATGGTTCCG GCAAGAGCAC GATGATGAAT
GTGCTGACCG GCATCTATGC GCCCAGCGGC GGCAGCATCG AGTTTGCCGG ACGCAGTGTG
CTGGGCCGCA GTTCGGCGGC CATTGCGCGC TCGGGCATCG CGCGCACCTT CCAGAACGTG
CAACTGTTTG GCGAGATGAC GGCACTGCAA AACGTGCAGG TGGGTTTGCA CCACAGCTTT
GCCAGCAACA TCCTGGACGT GGCGCTGCAC ACCCCGCGCT ATCTGCGCGA AGAGCAGGCG
GCCATCGAGC GCGGCCTGGG GCTGATCGGG TTTGTCGGCC TCGGCGACCT GGCCCACGAG
GAGGCGCGCA ACCTGCCGTA TGGCAAGCAG CGGCTGCTGG AAATTGCCCG CGCGCTGGCG
CTGGCGCCGC AACTGCTGCT GCTCGACGAG CCGGCGGCGG GACTGACGGC GCCGGACATC
GAGGAACTGG TGGCCATCAT CCGCAAGATT CGCGACCACG GCATCACCGT AATCCTGATC
GAGCACCACA TGGACGTGGT GATGGGCATT TGCGACCAGG TCCTGGTGCT GGACTTTGGC
CAGAAGATTG CCGAAGGCCG GCCCGCCGAC ATACAGGCCC ACCCGAAGGT CATCGAAGCC
TACCTCGGCG GCACGGCGGC ATGA
|
|---|
| Protein sequence | MQRNPLRIAV PGLALLAAMP LFIGNPYYIH MIGTIMIYAI LLFGLDIVVG YTGQVSLGHA
GLFGVGAYTA GVLFLKLGAP LWLIMVACIG VTAVFGALLA LPALRVSGPY LAMVTLAFGT
IIQILINEMG FLTEGPLGIK IPKPSIAGMK LDDNGFYWLV LALMALALLV VDRILRSHYG
RAFEALRGSP VASDCMGVSV YRYKVYAFVI SAGFAGLAGG LYAYSEQYIS PNTYNFELTV
LFLLAVIMGG RKTRSGALLG AAIIVILPKL LDDLELFRIV ASVLALLMAL GAALGLARKV
VTPRAVIVPV AGTVALAGFS FWLQSITDWR LTIFGLMILF VVYYLQDGIV GFVRSQWLRS
ARRSQTGGRQ TPREDAVLSG PGPSSGNGND DDGGDLLVAK DVLMQFGGLK ALNQVDLTVK
RGSIHGLIGP NGSGKSTMMN VLTGIYAPSG GSIEFAGRSV LGRSSAAIAR SGIARTFQNV
QLFGEMTALQ NVQVGLHHSF ASNILDVALH TPRYLREEQA AIERGLGLIG FVGLGDLAHE
EARNLPYGKQ RLLEIARALA LAPQLLLLDE PAAGLTAPDI EELVAIIRKI RDHGITVILI
EHHMDVVMGI CDQVLVLDFG QKIAEGRPAD IQAHPKVIEA YLGGTAA
|
|---|
| |