Gene Veis_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0600 
Symbol 
ID4690959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp669552 
End bp669887 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content57% 
IMG OID639848377 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_995401 
Protein GI121607594 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTGA CGATCAGCGG TCACCACCTC GAAGTAACCC CCGCCTTGCG CAGCTACGTC 
ACCACCAAGC TGGACCGGAT CACCCGGCAT TTTGACCAGG TTGTCGATGT CAAGGTGCTG
CTGACGATAG AAAAACAAAA GGAGAAAGAA AAACGCCAGC GAGCGGAATG CAACATCCAT
GTCAAAGGCT GTGACCTGTT TGCCGAAAGT TCCCACGCCG ACCTGTACGC GGCGGTCGAC
GAACTGGTCG ACAAGCTCGA CCGCCAGGTA GTGCGCCACA AGGATCGCTT GCAGGACCAC
CACCACGAAG CCGCCAAGCG CGAATTGCAC GTGTAG
 
Protein sequence
MNLTISGHHL EVTPALRSYV TTKLDRITRH FDQVVDVKVL LTIEKQKEKE KRQRAECNIH 
VKGCDLFAES SHADLYAAVD ELVDKLDRQV VRHKDRLQDH HHEAAKRELH V