Gene Veis_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0565 
Symbol 
ID4691591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp636230 
End bp636970 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID639848343 
Productflagellar basal-body rod protein FlgF 
Protein accessionYP_995367 
Protein GI121607560 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases
[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA TCATCTACAC CACGATGACC GGCGCCGGCG CTGCCGCCTA CCGGCAGGCC 
GTGCTGGCCA ACAACCTGGC CAACATCTCC ACCGGCGGCT TTCGCGCGCA ACTGTCCACC
TTCCGCTCCG TGCCGCTGCA AGGCGACGGC GCCAAGACCC GCGTTTTTGC GCTGGAGGCC
ACCTCGGGCT ACGACGACAG CGCAGGGCCC GTGCAGCACA CCGGCCGCAA CCTCGATGCG
CTAGCGGCAG GCCGGGCCTG GTTTGCCGTG CAAGGCCCGG ACGGCACCGA GGCCTACACC
CGCGCCGGCA GCTTCGAACT CTCGCCCACC GGCCAACTGC TGACCCCGGG CGGCCTGCCC
GTGCTGTCCG ATGCGGGCAC GCCGATCGAC ATGCCCCCCG GGGCCGACAT CACGCTGGGC
GCCGACGGCA GCATCAGCGC CAAGGTGGCG GGCCAGCCGG CGCAGACCGT GGGCCGGCTC
AAGCTGGCAA CGCCCGGCGC CGAAGACCCG CTGCAGCGCG GCGGCGACGG GCTGTTTCGC
ACCGCCTCGG GCGAGCCGCT GCCCAGCGAT GCCGACGCCC GCATGTTGGC CGGCGCGCTG
GAAGGCTCGA ACGTGAACCC GGTCGAGTGC ATGGTCGGCA TGATCGCCGC AGCGCGCCAG
TTCGAGCAGC AAATGCAGTT GCTGCAAACC GCCCAGACCA ATGACAAGAG CGCCAGCCGC
TTGCTCGGCG TCAACGACTG A
 
Protein sequence
MDHIIYTTMT GAGAAAYRQA VLANNLANIS TGGFRAQLST FRSVPLQGDG AKTRVFALEA 
TSGYDDSAGP VQHTGRNLDA LAAGRAWFAV QGPDGTEAYT RAGSFELSPT GQLLTPGGLP
VLSDAGTPID MPPGADITLG ADGSISAKVA GQPAQTVGRL KLATPGAEDP LQRGGDGLFR
TASGEPLPSD ADARMLAGAL EGSNVNPVEC MVGMIAAARQ FEQQMQLLQT AQTNDKSASR
LLGVND