Gene Veis_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0560 
Symbol 
ID4691525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp630090 
End bp632066 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content70% 
IMG OID639848338 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_995362 
Protein GI121607555 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTGC TCAACGTCAG CACCCGCGCG CTGTTGGCCG ATCAGGTGGT GCTGCAAACG 
ACCGGCCACA ACATTGCCAA CGTCAATACC CCCGGCTACT CGCGCCAGAG CGTCGCGCTG
CAGACCGTGC CAGGCCAGTT CACCGGCAAC GGCTACATCG GCCAAGGGGT GGACGTGGCG
GGCATCGTGC GCAGCCAGAG CGAGTTGCTC ACGCGCCAGT CGGCGGCGGC GGGCGCCGCG
CAGTCGGCCG ACGCCGTGCG CGCCGAACGC TTGGGCCAGT TGCAGGATGT TTTCAGCGGC
GGCAGCGCCG GCCTGGGCGC GGCCATCAAC GACATGCTCA ACGCCTTCGC GGATGTGCTC
GGCGCCCCGA CCGACATCAC CGCGCGCACG GTGGTGCTCA CGCGCATCGA CGAAACCGCA
GCGCGCATGC GGACGGCGGC AGGGCGCATG GACGAGATCC AAGCGGCCGC CAGCGCGCAG
TTGCAAAGCA GCGTCGGCGT CGTCAACGAC CTGGCCATGC AGATGGCCGC CGTGAACGAG
CAGATCACGC GCGCCAAGGG CAATGGCCAG ACCCCGAACG ACCTGCTCGA CCGGCGCGAC
CAGATCATCC GCGACATCAA CCAGCAATTG CAGACCACGC AGATCCCCGC CGACGATGGC
AGCGTGGGCC TGTTCGTCGC AGGCAGCCAG CCGCTGGTGC TCGGCAACAC GGCGACCAGC
CTGTCGATCG CCGAGGCCAG CGCCTTTCCC GGCAGCGGCC AGGCCCGGTT GTTCTTCAAC
CGCCCCGGCG CCAAACCGGT GGAGATGGAC GACAGCCTGC TCGGGGGCGG GGCCATCCCG
GGCCTGCTGC GCTTTGACAA CCACGACCTG AGCGAAGGGC GCAACCTGCT CGGCCGCATG
GCCATGGGCC TGGGCCTGGC GCTGAACCAG CAGCAAAACC AGGGCCTGAC GCTGGACGGC
CAGCCCGGCA AAAACCTGTT CGGGCTGCCG GCCAGCATGC CGGGCCATAC CAGCGGCGCC
GGGGTCGGCA CGGTGACCTT CAGCGACCCG ACCCGGTTTG CCGCATCGGA CTACGAGATC
CGCTTTGCCA CCGGCAGCGC CGGGCAGGTG GTGCGGCTGT CGGACGGCCA GGCCACGCCG
TTCACCGACC CCGCCCAGTT GGCCGCGCAG GCCATCGACG GCCTGCGCTT TGACCTGACC
CGGCCGGGAG CGCCCGGCCA GAGCATGCTG TTCAAGCCGT TCGGCACGGC GGCGTCGAAC
CTCCAGGCGC TGGTGCACGC GCCCCGCGAC CTGGCGGCGG CCAACCCGGT CATGGCGGCC
ATGGGCAGCG CCAATGGCGG CACCTTGCAA CTGGCCGGCC TGAAGGCCAC GGGCCTGCCC
CATCCGCCCG GGCTGGTGTT GCCGGCGAAT GCGAACCCGG CGGCGACACC CCCCATCGCG
GGCGGCGTCC AACTGCAATT CGATGCCGGC CCCCCGATGC GCTACGACGT TCTGGACCGC
CGCACCACCC CCCCGACCAC CGTGGCCACG GCCCAGCCCT ATGTCTCGGG CGCGCCGATC
GCCATCGATG GCTGGGAGAT CAGACTGCAA GGCGCGCCGA ACACGGGCGA CACGGTGCTG
ATCGGCAATG CGCTCGACCC GCAATACGGC GACCGCTTCA GCCGCGATAC GGGCAACGCC
AGCGCGCTGA TGGACCTGCG CGACCTGAAG ATGTTCGACG AATCCACACT CAGCGACGGC
TACGCGCAGG CCATTGCCCA GGTCGGCACG CGCACCCAGA GCGCCAAGTT CGCCGCCGAT
CTGTCGCGCA CCATCGCCGC CAACCTGGAG CGCGACCGCA CTGCCATCTC GGGGGTGAAC
CTCGACGAAG AGGCCGCCAG GCTGATCCAA TACCAGCAGG CTTTCCAGGC CTCGTCAAAA
GTGATGCAGG TCGCGCAAAA CATCTTTGAC GCGCTGCTGC AGGGCCTTGC GCGCTGA
 
Protein sequence
MGLLNVSTRA LLADQVVLQT TGHNIANVNT PGYSRQSVAL QTVPGQFTGN GYIGQGVDVA 
GIVRSQSELL TRQSAAAGAA QSADAVRAER LGQLQDVFSG GSAGLGAAIN DMLNAFADVL
GAPTDITART VVLTRIDETA ARMRTAAGRM DEIQAAASAQ LQSSVGVVND LAMQMAAVNE
QITRAKGNGQ TPNDLLDRRD QIIRDINQQL QTTQIPADDG SVGLFVAGSQ PLVLGNTATS
LSIAEASAFP GSGQARLFFN RPGAKPVEMD DSLLGGGAIP GLLRFDNHDL SEGRNLLGRM
AMGLGLALNQ QQNQGLTLDG QPGKNLFGLP ASMPGHTSGA GVGTVTFSDP TRFAASDYEI
RFATGSAGQV VRLSDGQATP FTDPAQLAAQ AIDGLRFDLT RPGAPGQSML FKPFGTAASN
LQALVHAPRD LAAANPVMAA MGSANGGTLQ LAGLKATGLP HPPGLVLPAN ANPAATPPIA
GGVQLQFDAG PPMRYDVLDR RTTPPTTVAT AQPYVSGAPI AIDGWEIRLQ GAPNTGDTVL
IGNALDPQYG DRFSRDTGNA SALMDLRDLK MFDESTLSDG YAQAIAQVGT RTQSAKFAAD
LSRTIAANLE RDRTAISGVN LDEEAARLIQ YQQAFQASSK VMQVAQNIFD ALLQGLAR