Gene Veis_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0559 
Symbol 
ID4691226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp628810 
End bp630063 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content69% 
IMG OID639848337 
Productflagellar hook-associated protein 3 
Protein accessionYP_995361 
Protein GI121607554 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.981861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG ACATTACCCG CCTTGGCACG GCCAATATGT ACGACAGCGC GCTGCGCAAC 
CTGGGAACGC GCCAGAGCCA ACTGGCCAAC CTGCAGGAGA GCCTGACCTC GGGCAAGCGC
GTGGTGCGGG CCAGCGACGA CCCGGTGTCC GCCGCGCAGG CCGAACGCGC GCTCAACCGC
CTGGCGCGCA TTCAGAGCGA CCAGCGCGCA CTGGCCGCCC AGCGCAACGC CATCGCGCTG
GGCGAATCCG CGCTGGGCGA TGCCGTCGAC CTGGTGCAGA ACTTTCGCGC ATTGGTGGTC
AGCGCCGGCG ACGCCAGCCT CCAGCCCGCA GACCGCGCAA CCATCGCCAA CCAACTGCAA
AGTCTGCGCG AGCAACTGCT GCAAGTGGCC AACCGCAAGG ACACCAACGG CGTTGCGCTG
CTCAGCGCGC TGGGCAGCGC GCAGACGCCC TTTGCCGGGC CGTTGGGCGG CGCCCCCGAC
TACCGCTTTG CCGGCCAGCC CGGCCAGAGC GCCAGCGCCG GGGCGCGCAT TGCCGCAACG
CTGGACGGCG ACGCGGCCTT CATGTTCGAC CCCCGGCGCG ACGGGGTCTA CACCGCAACC
GTCAGCCCCA TCCCGACAGG CCGGCAACTG ACCACCAGCG CCGTCACACC CACCGCCCCG
CGCCTGGTCA CCGGCGACGA CTACCGCATC ACCTTCAGCG CCGCAGGCCC GGGCGCCACG
CCCGGCACCA GCAGCGCCAG CTACACCATC ACGAACAGCA GCACCGGCGC CGTGTCCGCC
CCCGTGCGGC TGCCCGACTT TCGCGCCGAC GAACCGCTGA CCGTGACCGT CACCGGCATC
CCCGGTCTGA GCCTGGACAT CCAGGGCCTG CCGGCCGACG GCGACAGCAT CACACTGCGC
CCCGGCACCA GCCTGTTTGG CACGCTCGAC AGCGCCATCG ACGGCATCCG CCGAGCGCCC
AACCAGAACG CAGCCATACA AAGCGTAGGG CAGGCGCTGG CCAATATCGA CCTCGGGCTG
GAGCGGGTGC ACGACATGCG CGGCTATGCC GGCGAACTGC TCAACCGCGC CGACCGCATC
TCGGGCGACC AGACCCAGCG CTCGATACAG CTCGAAAGCG ACCGCTCCCG GGCCGAGGAC
CTGGACATGA TCCAGGGCAT CTCGGACTTC CAGAACCAGC AAGTGGGCTA CCAGGCGGCG
CTCAAGTCCT ACGCCCAGGT GCAAAGATTG TCGCTGTTCC AATACATCGG CTGA
 
Protein sequence
MSNDITRLGT ANMYDSALRN LGTRQSQLAN LQESLTSGKR VVRASDDPVS AAQAERALNR 
LARIQSDQRA LAAQRNAIAL GESALGDAVD LVQNFRALVV SAGDASLQPA DRATIANQLQ
SLREQLLQVA NRKDTNGVAL LSALGSAQTP FAGPLGGAPD YRFAGQPGQS ASAGARIAAT
LDGDAAFMFD PRRDGVYTAT VSPIPTGRQL TTSAVTPTAP RLVTGDDYRI TFSAAGPGAT
PGTSSASYTI TNSSTGAVSA PVRLPDFRAD EPLTVTVTGI PGLSLDIQGL PADGDSITLR
PGTSLFGTLD SAIDGIRRAP NQNAAIQSVG QALANIDLGL ERVHDMRGYA GELLNRADRI
SGDQTQRSIQ LESDRSRAED LDMIQGISDF QNQQVGYQAA LKSYAQVQRL SLFQYIG