| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0540 |
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| Symbol | |
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| ID | 4691723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 608248 |
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| End bp | 609261 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639848318 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_995342 |
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| Protein GI | 121607535 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.625746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAC GCCGCCCCGC TGTCGTTCTT TCTGCCCTCG CCCTGTCGGG CGCCATGGTC
TGCGCCCTGG CCCGGGCTGC CGACGCGCCT GTGATCGGCC TGATCACCAA GACCGAAACC
AACCCCTTTT TCGTGACCAT GAAAGAAGGC GCCGTCGCCG AGGCGAAAAA ACTCGGCGCC
AAACTGGTCG CCACCGCCGG CAAGGCCGAT GGCGACAATG CCGGCCAGGT GACGGCGCTG
GAGAACCTGG TGGCTGCCGG GGCCAAGACC ATCCTGATCG CCCCGAACAA CGCCCAGGCC
ATCGTGCCGG CGATCAAGAA GGCCCGGGCC AGCGGCGTGA TGGTGATTGC GCTGGACAGC
CCCACCGATC CGGTGGATGT CGTCGATGCC TTGTTTGCCA CTGACAACTA CAAGGCTGGC
GAGTTGATCG GCCAGTACGC CAAGGCGGCA ATGGCGGGCA AGAAGCCGGT GATCGCGATG
CTCGATCTGC TCCCTGGCCA CCCGGTGGGT GCGCAGCGGC ACAACGGCTT CCTCAAGGGT
TTCGGTCTGC CGACCCTCGA GGCCCACAGC AATGAACTGG CCCGCCCGCC CGAAGTGGTC
TGCATGGCCG ACAGCTTTGG CGACCGCACC AAGGGCCAGA CCGCGATGGA AAACTGCCTG
CAAAAGAACC CCGACATCAA CCTTTTGTAC AGCATCAACG AACCCGCAGC GGCCGGCGCC
CATAAGGCAT TGAAAGCCGC AGGCAAGGAA AAGAACATAC TCATCGTGGC GGTGGACGGC
GGTTGCGCCG GCATCGCCGA TGTCGACCGG GGGGTGATTG CCGCCACCAG CCAGCAATAC
CCGCTGCGCA TGGCGGCCAT GGGTGTGGCG GCGGGCGTCG AGTACGCCAA GACCGGCAAG
AAGGCCAGCG GCTATACCGA CACCGGCGTG ACGCTGATTG CAGCCAAGCC GCAAGCCGGC
GTGGACAGCC AGGACGTGAA GACCGGCGCC AGCCTGTGCT GGGGCAAGAA GTAA
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| Protein sequence | MLQRRPAVVL SALALSGAMV CALARAADAP VIGLITKTET NPFFVTMKEG AVAEAKKLGA
KLVATAGKAD GDNAGQVTAL ENLVAAGAKT ILIAPNNAQA IVPAIKKARA SGVMVIALDS
PTDPVDVVDA LFATDNYKAG ELIGQYAKAA MAGKKPVIAM LDLLPGHPVG AQRHNGFLKG
FGLPTLEAHS NELARPPEVV CMADSFGDRT KGQTAMENCL QKNPDINLLY SINEPAAAGA
HKALKAAGKE KNILIVAVDG GCAGIADVDR GVIAATSQQY PLRMAAMGVA AGVEYAKTGK
KASGYTDTGV TLIAAKPQAG VDSQDVKTGA SLCWGKK
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