| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0539 |
|---|
| Symbol | |
|---|
| ID | 4692176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 607114 |
|---|
| End bp | 608082 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639848317 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_995341 |
|---|
| Protein GI | 121607534 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCGA TCACTTTCCG ACGGCCGCCG CAGGTCACAC TGGCCACGCT CGGTCCCTTC
ATCGCGCTGA TTCTGGCCTG CGCCTTTTTT GCCTCGCAGA GCGAGCGCTT TTTGTCGGCG
CAGAATTTCT CGCTGATCCT GCAACAGGTC ATGGTGGTGG CGGTGATCGC GATCGGCCAG
ACGCTGGTGA TCCTGACCGC CGGCATCGAC CTGTCCTGCG GCATGGTGAT GGCGCTCGGC
AGCATCGTGA TGACCAAGAT GGCGGCCAGC CACGACCTGT CCGCCCCGCT GGCGATAGCC
TGCGGCATCG CGGTGACGGT GCTGTTCGGT CTGGTCAACG GCCTGTTGGT CACCAAGATC
GCGCTGCCGC CATTCATCGT GACGCTGGGC ACGATGAACA TCGCGTTTGC GATCACGCAG
TTGTACTCGG ACGCGCAGAC CATCACCGAC ATCCCCGAGG GCATGACCCT GCTGGGCGGC
ACCTTCGTGC TGGGCCAGAC CGCCATCGTC TGGGGCGCGG TGCTGATGCT GGCGCTGTAC
CTCATCGTCT GGTTTGCGCT GCGCGAGACC GCCCCGGGGC GCCATGTCTA CGCCGTGGGC
AACAACCCCG AGGCCACGCG CCTGACCGGC ATTGCCACCG ACCGGGTGCT GCTCGGTGTG
TACATGCTGG CCGGCCTGTT CTACGGCATC GCCGCGCTGC TGTCGGTGGC CCGCACCGGT
GCCGGCGACC CGAACGCGGG CCAGACCGAG AACCTCGACG CGATCAGCGC CGTGGTGCTG
GGCGGCACCA GTCTGTTTGG CGGGCGCGGC ATGATTCTGG GCACGCTGGT GGGGGCGCTG
ATCGTGGGCG TGTTCCGCAA CGGGCTGACG CTGATGGGCG TGTCTTCGGT CTACCAGATC
CTGGTCACCG GCATCCTCGT CATTTTGGCC GTGGCCACCG ACCAACTCTC ACGCCAAGGG
GTGCGCTGA
|
|---|
| Protein sequence | MPSITFRRPP QVTLATLGPF IALILACAFF ASQSERFLSA QNFSLILQQV MVVAVIAIGQ
TLVILTAGID LSCGMVMALG SIVMTKMAAS HDLSAPLAIA CGIAVTVLFG LVNGLLVTKI
ALPPFIVTLG TMNIAFAITQ LYSDAQTITD IPEGMTLLGG TFVLGQTAIV WGAVLMLALY
LIVWFALRET APGRHVYAVG NNPEATRLTG IATDRVLLGV YMLAGLFYGI AALLSVARTG
AGDPNAGQTE NLDAISAVVL GGTSLFGGRG MILGTLVGAL IVGVFRNGLT LMGVSSVYQI
LVTGILVILA VATDQLSRQG VR
|
|---|
| |