| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0528 |
|---|
| Symbol | |
|---|
| ID | 4692841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 593987 |
|---|
| End bp | 594808 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639848306 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_995330 |
|---|
| Protein GI | 121607523 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCA AGTTCTGGCT CGGCTCGGCC ATCGTCGGCC TGACGGTTCT GCTCGGACCG
GTGGCCGCCA TGTTCGCCCC GCAGGACCCG CGCACCTGGC AGACCTACCC GAGAAACCTG
GGGCCATCGC TCGATCATTT CCTCGGCACC ACGGCCCTCG GGCAGGACAT CTTCTGGCTG
CTGAGCTGGT CGGTGCGCAA CTCCTTGCTG CTCGGCGTGA CGGTCGGCGC GTTGGCGACC
ATCATCGGTG TCGCTGCCGG TCTGGTTGCG GGCTACCGTG GCGGGCTGTC CGACCGGGTA
CTGTCTTTCT TGATGGATGG GCTGATCGTC ATTCCGAGCC TGCCGCTGCT GATCCTTTTG
TCGGCGCTGT CCAAGGGGCA GGCGTCGATG GCCGTTCTGG GTGGCATGTT GGTGCTCTTC
AATTGGCCGT TCCCGGCGCG CCAAGTGCGC TCTGTCGCGC TTTCGCTGCG CGAGCGCGAC
TTCGTCAGTC TGGCGTGGTT CTCGGGCGAA AGCCTGCTGC GCATCGTGCG TTGGCAGTTG
TTTCCGTACC TGCGCAACTG GGCCGTCGCC AACTTCATCA ACACCATTTT GGTCGTCATC
GCCGTCGAGT CGAGCCTGGC GTTTCTGGGC CTGTCCAACG ATGCGATACC AACGCTCGGC
ACGATGATTT ATTGGGCCTT GAAGTACCAG GCGCTGTTTG CCGGGCGGTG GTACTGGATC
GTGCCGCCGA TCCTGGCGGT GATCCTGATC TTTGTCGGCC TGTTCCTGTT TTCCAATTCG
CTGACGGATC GTCTGCGCAA ACACCCGGGA GCCGCGCTGT GA
|
|---|
| Protein sequence | MRIKFWLGSA IVGLTVLLGP VAAMFAPQDP RTWQTYPRNL GPSLDHFLGT TALGQDIFWL
LSWSVRNSLL LGVTVGALAT IIGVAAGLVA GYRGGLSDRV LSFLMDGLIV IPSLPLLILL
SALSKGQASM AVLGGMLVLF NWPFPARQVR SVALSLRERD FVSLAWFSGE SLLRIVRWQL
FPYLRNWAVA NFINTILVVI AVESSLAFLG LSNDAIPTLG TMIYWALKYQ ALFAGRWYWI
VPPILAVILI FVGLFLFSNS LTDRLRKHPG AAL
|
|---|
| |