| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0525 |
|---|
| Symbol | |
|---|
| ID | 4692563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 590580 |
|---|
| End bp | 591650 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639848303 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_995327 |
|---|
| Protein GI | 121607520 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT TAGGATCACA GCCAGACCCC GATCGGCGCG CACCGACGAT GGTTGACGTT
GCCAAGCTCG CCGAGGTCTC GCTGGCCACG GTGTCGGCGG TCATCAACGA CTCCGCGCCG
GTCAGCGCCG ACCGCAAAAA GCGCGTGCTC GACGCGATAC GGCGCGTCGG CTATCAGACC
AATGCGATTG CACGCAGCCT GAAAACGGGC AGCACGAAAA CCATAGGGCT GATGATCGCC
GACATCACCA ACCCGTTCTT CACCGCCGTG ATCCACTCGA TCCAGGAAGT CGCCTACCAC
CATGGCTACG GCGTCATGCT CTGCTGCAGC GATGAGGACC CGGAAAAGGA GCGGCTGCAT
CTGCGGCTGA TGTCGGATCG GATGGTCGAT GCGCTCATCA TTGCCACTGC GGGAGAAACA
CCGCCATTGC GCGCCCTGAT CGACAGCCGC CGCAAGCCCG TGGTGCTGAT CGACCGCCTG
CTCGACGGCG TGGCGACGGA CGCCGTGGTG ATAGACAACG TGGCGGCGGC GCGCGATGCC
GTGCGCTACC TGGTTTCCCT CGGGCATCGC CGCATCGGGT TGATCACCGG CAAAAGCACC
CTGTCGACCG CCAGGGAACG CTACCAGGGC TATTGCCAGG CGCTGGCCGA GGCCGGCATT
GCCATAGAGA ACGCACTGGT GGGGGCGGCC CGGTTCGGCT CTGCAGATGG CTACGGCGCT
GCCATGGGCC TGCTGTCACT TGCCGAGCGA CCGACGGCGA TCTTCGCCAG CAACAACCTT
TCGGGGATCG GGTTGATGCG TGGCATCAAG GACTCCGGCC TGCGCTGTCC GGCCGATATC
TCGGTGGCCT GCTTTGATGA CTTCGAGTGG GCCGATGTCT TCGAGCCGCG CCTGACGACG
CTGGTTCAGC CAACCCGGGC CATCGGCGCC CAGGCGATGG CAATCGTTCT CGAACACCTG
CAAGATGGCG GCGCGCAGCG ATCGGCGGCG CGGGTGGTGC GGATGCGTGC GCAATTGCGC
ATCCGCGATT CATGCGTCAT GTGGCCGCCG CCCCCGGGTC TTTCCACCTG A
|
|---|
| Protein sequence | MKRLGSQPDP DRRAPTMVDV AKLAEVSLAT VSAVINDSAP VSADRKKRVL DAIRRVGYQT
NAIARSLKTG STKTIGLMIA DITNPFFTAV IHSIQEVAYH HGYGVMLCCS DEDPEKERLH
LRLMSDRMVD ALIIATAGET PPLRALIDSR RKPVVLIDRL LDGVATDAVV IDNVAAARDA
VRYLVSLGHR RIGLITGKST LSTARERYQG YCQALAEAGI AIENALVGAA RFGSADGYGA
AMGLLSLAER PTAIFASNNL SGIGLMRGIK DSGLRCPADI SVACFDDFEW ADVFEPRLTT
LVQPTRAIGA QAMAIVLEHL QDGGAQRSAA RVVRMRAQLR IRDSCVMWPP PPGLST
|
|---|
| |