Gene Veis_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0505 
Symbol 
ID4693777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp571337 
End bp571816 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content55% 
IMG OID639848283 
Productfimbrial protein pilin 
Protein accessionYP_995307 
Protein GI121607500 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC AACATGTGCA GGGCGGTTTC ACGCTGATCG AGCTGATGAT CATCGTGGCG 
ATCGTAGGTC TTTTGTCTGC CTTGGCCTAT CCCTCCTTCA GGGAGCAGGT GATCAAATCC
CGGCGCGCGG ACGCCAAGAC CATCCTGGTC AGTGCGCAGC AATGGATGGA GCGGTTTTAT
ACGGAGAATT TTCGCTACGA TAAAAACAGG GCCGGTGTGA GGGCGGATGA TCCGACGCAG
TTTCCGGCCA GGTTCAGCGT TTCTCCCACC GAGGGGAGCG CGCTCTATGA TATTGCCGTC
GTGGTTGAGG ATGGAGAGCT TGACAAATAT TCAGTCACGG CTACGCCCAG GGCGGGTTCT
GCAATGGCCA GAGACCGTTG CGGGAATTTT CGCATCGATC ATTCAGGGCA AAAAACCGTG
TTTTCCCATG GATTTGGATC TGCCAATGAT GCGATGGCCA ACAGGGTTTG CTGGCAATGA
 
Protein sequence
MKHQHVQGGF TLIELMIIVA IVGLLSALAY PSFREQVIKS RRADAKTILV SAQQWMERFY 
TENFRYDKNR AGVRADDPTQ FPARFSVSPT EGSALYDIAV VVEDGELDKY SVTATPRAGS
AMARDRCGNF RIDHSGQKTV FSHGFGSAND AMANRVCWQ