Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0505 |
Symbol | |
ID | 4693777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 571337 |
End bp | 571816 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639848283 |
Product | fimbrial protein pilin |
Protein accession | YP_995307 |
Protein GI | 121607500 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACC AACATGTGCA GGGCGGTTTC ACGCTGATCG AGCTGATGAT CATCGTGGCG ATCGTAGGTC TTTTGTCTGC CTTGGCCTAT CCCTCCTTCA GGGAGCAGGT GATCAAATCC CGGCGCGCGG ACGCCAAGAC CATCCTGGTC AGTGCGCAGC AATGGATGGA GCGGTTTTAT ACGGAGAATT TTCGCTACGA TAAAAACAGG GCCGGTGTGA GGGCGGATGA TCCGACGCAG TTTCCGGCCA GGTTCAGCGT TTCTCCCACC GAGGGGAGCG CGCTCTATGA TATTGCCGTC GTGGTTGAGG ATGGAGAGCT TGACAAATAT TCAGTCACGG CTACGCCCAG GGCGGGTTCT GCAATGGCCA GAGACCGTTG CGGGAATTTT CGCATCGATC ATTCAGGGCA AAAAACCGTG TTTTCCCATG GATTTGGATC TGCCAATGAT GCGATGGCCA ACAGGGTTTG CTGGCAATGA
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Protein sequence | MKHQHVQGGF TLIELMIIVA IVGLLSALAY PSFREQVIKS RRADAKTILV SAQQWMERFY TENFRYDKNR AGVRADDPTQ FPARFSVSPT EGSALYDIAV VVEDGELDKY SVTATPRAGS AMARDRCGNF RIDHSGQKTV FSHGFGSAND AMANRVCWQ
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