| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0502 |
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| Symbol | |
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| ID | 4693586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 564468 |
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| End bp | 565529 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639848280 |
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| Product | Tfp pilus assembly protein PilW-like protein |
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| Protein accession | YP_995304 |
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| Protein GI | 121607497 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAT CGATCCGAGC GCAACAGGGC CTGAGCCTCG TCGAATTGCT GGTGGCAATG
ACCATCAGCC TGGTCGTCAT GATCGCTGCT GCTTATGTAT ATCTGTCAGC GCGCGAATCA
CAACGGGCCA TCGACAGAAC CGGCAGCAGC CGTGAAACCG GCGCATTCGT GATGCAAATG
CTGGGGCATG AAATCAGGAA TGCAGGGTTT TATCCTGCCA CGGTGGCGCC GATTTTTTCG
GACCCCGCCC AACAGGGCAT GTACGACACC TATCCCCCGC TGCCATCCGA TCCACGGGTA
GCGACCGACT GGCAAAACCC CGCCGAGGGC TGGCCACCCG CAGCGTTCCA AGCCGGTATT
TTTGGCTGCG ATGGTGGCGA ATTCAACGTT ACAACCAGCA CCTGCCCCAC GGTGGATGCG
GACGCGGCGG ATACCTTGGT CATCAACTAT TTCACCAGCG ACACCAAAAC CATGGGAAGC
AATGCCGGCC AGCGCTGGGA CTGCACTGGC CACGATGTGG CCCCCGGTGA GGCCGGGGCA
GGGGGCGATC CCAGCAACGA TGTACGCAAG AAAAACTCGA ACGGCAGTCC TCCAACGCAG
ACGAATGAAG CCATACCCCC GCAACTGCCC GTATTTGTGT CGAATCGCTT TACGCTCAGG
GATGTCAGAG TCGCCGATCA GTTTCAAGAG ATCGGCACCA AGAGCCTGGT GTGCAGCGGA
AATGGCAAAA GCCCCCATGG AGCAACGGAT GAAACAGCAT ACCAATCCAT CATCGCAGGA
CTGGAAGACC TGCAATTTGC TTACGGTATC CACAACGGAA CGAGCATGCA GTTTCATACG
GCAACACAAA TCGATGGCAA TGCCCCGCTC CTTTGGCGAA ATGTGACCGT GGTGCGCGTT
TGTCTGCTGA CGCGCACCCT TGGCGGCAAT ACGCGCCTGC CAGGCGCACC GAGCACATAC
CGCGATTGCA ACGGTGCCGA GAAAGACCAT CCCGCCGGCG ACACCATCAC CCGGCATGTT
GAAGAATTCG GTTTGCGCAA TAATATGAAA CAATATTACT AG
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| Protein sequence | MFKSIRAQQG LSLVELLVAM TISLVVMIAA AYVYLSARES QRAIDRTGSS RETGAFVMQM
LGHEIRNAGF YPATVAPIFS DPAQQGMYDT YPPLPSDPRV ATDWQNPAEG WPPAAFQAGI
FGCDGGEFNV TTSTCPTVDA DAADTLVINY FTSDTKTMGS NAGQRWDCTG HDVAPGEAGA
GGDPSNDVRK KNSNGSPPTQ TNEAIPPQLP VFVSNRFTLR DVRVADQFQE IGTKSLVCSG
NGKSPHGATD ETAYQSIIAG LEDLQFAYGI HNGTSMQFHT ATQIDGNAPL LWRNVTVVRV
CLLTRTLGGN TRLPGAPSTY RDCNGAEKDH PAGDTITRHV EEFGLRNNMK QYY
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