| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0500 |
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| Symbol | |
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| ID | 4693018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 563147 |
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| End bp | 563803 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639848278 |
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| Product | Tfp pilus assembly protein FimT-like protein |
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| Protein accession | YP_995302 |
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| Protein GI | 121607495 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCATC AATCACCCCG GGCTGGCGCT GCCCACCCAA GCATGCAACG GCTGCGCGAG
CAACTCCCGA AAAGCCGTCT GCGCACCGTG GCGCGAGGCT TCACGCTGAC CGAACTCCTG
ATGACGCTGG CCCTGGCCGC CATCCTGGGC AGTTTGGCGG CGCCCGCGGT GCGGGACTTC
ATTGTTCGCA GCAAGCTGAC CAATCTCGGC AACGAATTCA TCAGCAGCGT TCTGAAAGCC
CGTAGCGAGG CCGTCAATCG CAATACCTGT GTCACCCTGT GCCTGAGCAG TAATGCAGAC
GCTGACGCAC CCGCCTGCGC AAGCACCACG CCAACGACCG ATTGGCACAA GGGTTGGATT
CTTTTCCTCA ACCCCATCTG CAACAACGAC GCCACGGCCC CAGCAGACCC CATCAATATG
TTGCTGGCCC GTCCGGCAGC AAACGCGGAT TACAGCTTGC TGGCGCAGAA CGGCAAAACA
AAAATGATTT TCAATGCGCA CGGAGGGCTT GCGAATGCCG ATCTGGAACA ATTCAATCTG
ATTTACAAAA GCAGCGAAGA TCCACTGACA AAAAAATTCG CCTTCAATAT TTGCATGAAT
GGTCTGGGGC GTACCCGCAT GATTCCCCCC AATAAAACAT GCACGAATTA CCATTGA
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| Protein sequence | MIHQSPRAGA AHPSMQRLRE QLPKSRLRTV ARGFTLTELL MTLALAAILG SLAAPAVRDF
IVRSKLTNLG NEFISSVLKA RSEAVNRNTC VTLCLSSNAD ADAPACASTT PTTDWHKGWI
LFLNPICNND ATAPADPINM LLARPAANAD YSLLAQNGKT KMIFNAHGGL ANADLEQFNL
IYKSSEDPLT KKFAFNICMN GLGRTRMIPP NKTCTNYH
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