| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0471 |
|---|
| Symbol | |
|---|
| ID | 4692865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 537866 |
|---|
| End bp | 538561 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639848250 |
|---|
| Product | lipoate-protein ligase B |
|---|
| Protein accession | YP_995274 |
|---|
| Protein GI | 121607467 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0321] Lipoate-protein ligase B |
|---|
| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.624185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.639585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGG TCGTCCGCAC GCTCGGCCGC GTGGACTACC TGGCCACGGT GCAGGCCATG
CAGGACTACA CCGCCCGGCG CGGCCCGCAA GACCCGGACC TGCTCTGGCT GTGCGAGCAT
GACCGGCTCT ACACCCAGGG CCTTGCCGGC CAGGACCGGC ATGTCCTGGC CCCCGGTGAC
ATTCCGGTGC TCCAGAGCAA CCGTGGCGGA CAGGTCACCT TCCATGGTCC TGGCCAGGTG
GTGGCGTATC CGTTGATCGA TTTGCGGCGT GCCGGGTACT ACGTCAAGGA ATATGTCTAC
CGCATCGAGG AGGCGGTGAT CCGCTGCTTG GCGCAGTGGG GCGTCACCGG CCACCGTGTC
GCCGGCGCGC CGGGCATTTA CGTTCGTCCG GATGATCCGG GCGGCCATGC ACTGCTGCCG
CTGCGCCCGC CAAAAAGCCC GGGCACCCCG GCCCCTGCGC CCGACTTCCA GGGCCTGGGC
AAGATCGCGG CCCTGGGCGT CAAAGTGAGC CGGCATTGCA GCTACCACGG AGTAGCGCTC
AATGTGGCGA TGGACCTGGA GCCTTTTGCG CGCATCAACC CTTGCGGTTA CGCCGGACTG
CGCACGGTGG ATCTTTCTAC AATCGGAGTC CGGCTCCGCT GGGACGAAGC CGCGCAGTTG
CTGGGCCGGC AGCTTTGCAT CTGGCTGGCG CCCTGA
|
|---|
| Protein sequence | MSMVVRTLGR VDYLATVQAM QDYTARRGPQ DPDLLWLCEH DRLYTQGLAG QDRHVLAPGD
IPVLQSNRGG QVTFHGPGQV VAYPLIDLRR AGYYVKEYVY RIEEAVIRCL AQWGVTGHRV
AGAPGIYVRP DDPGGHALLP LRPPKSPGTP APAPDFQGLG KIAALGVKVS RHCSYHGVAL
NVAMDLEPFA RINPCGYAGL RTVDLSTIGV RLRWDEAAQL LGRQLCIWLA P
|
|---|
| |