| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0423 |
|---|
| Symbol | |
|---|
| ID | 4693310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 480374 |
|---|
| End bp | 481957 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639848204 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_995229 |
|---|
| Protein GI | 121607422 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.204725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.294412 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTT CAAACCTGCG CATCATGGCG ATGCTGGTCA TCAGTCTTGC TGCGGCGCTG
CCGGCAAGCG CCAAAACCTT GGCGTGGACG GCGGGGATGG ATGCGGTATC GATGGACCCG
CATTCGTCCA ACAGCACGTT TACCAACGCC TTTGTCACCA ATGTGTATGA ATCTCTGGTG
CGTTTCGATG ACAAACTGAA GATAGAACCG GCGCTGGCCG AGTCCTGGAA AATGACCACT
CCCATGGTCT GGCGTTTCAA TCTGCGGCGC GGCGTGAAAT TCCATAATGG CGAAGCGTTT
GGCGCCGATG ATGTCGTGTT TACCTGGGCC CGCGTGAATT CGCCCGGCTC GCTGGTGCGG
GGCAACCTGA GCGACATCAA GGAGGTGCGC AAGGTAGATC AGTACACGGT CGATATCGAG
ACCAAAACGC CATTTCCCAC CCTGCTGAAT GAACTGGTGC AATTGCTGGT CATGAGCAAG
TCTTGGTCGG AGGCGAACAA TGCGACCGAA GCCAGCGATA TCACGCAGAA AAAGGAAAAT
TTCGCCAACC GCCATACCAA TGGCACCGGC CCTTTCATCA TGAAATCGCG CGAGGTCGAT
ATCAAGACGG AGTTCGTTGC CAACCCGAAC TGGTGGGACA AAAAGCTGCG CCATAATCTG
AGCGATGTGG CGTTTATGCC GATCAAGTCG GATGCGACGC GCACTTCTTC GTTGTTGTCG
GGCGTGGTGG ATGTGTCGGT CGATGTGCCG GTGCAGGATG TCCAGCGCTT GCAGGCGGGG
GCTGCCATCA ACCTTGTTCA AGGCCCGGAA TTGCGCACCA TCTCTCTTGG CATGGACCAT
GCTCGTGATG AGTTGCTGTA TAGCGATGTC AAGGGCAAGA ACCCGTTCAA GGATTTGCGC
GTCAGGCAGG CGATGTATCA GGCCATCGAT GTCGAGGCGC TCAAGCGGGC GGTGATGCGC
GGCGCTTCCT GGCCGGCCGC TACCATGATT TCCCCATTTT TGAATGGCGC ACCGGTGAGC
TTGAACAAGC GCGTCCTTGC CTACGATCCG GCGGCGGCGA AAAAATTGCT GGCCGATGCC
GGCTATCCCA ACGGTTTTTC CGTTGGCATG CAGTGCCCGA ACAGCCGCCT GGTGTATAGC
GAGCAGTTGT GCCTGGCCAT CGGCACCATG CTCTCGCGTG TCGGCATCAA GGTCAATCTG
ATGATAGAGC CCATCGCAAA ATGGATCGAT CGTTTGAATT CGACCGATTT GTCGCTCTAC
ATCATGAGCC ATGCCGGGTT GCCGATGGCC GATGCCTACG CGATTCTCAA GGATGTCGTG
GGCACGCACA CGGCAACCAT TGGCGGCTTG AACGCAGGCC GGTATTCCAA TCCGAAGTTT
GACGAATACC TGCCGAAAAT CGCCAGCGAG CTCGATACCG CCAAACGCAA CCAGTTGATC
ACCGAGGCGG TGACGATAGA GCGCAACGAT ATTTCACATA TTCCGCTGCA TCAGCAGCCG
GTGATCTGGG CGGCGAAAAA GGGTATTGAA TTGCACCAAT CGCCGGATAA CCAACTGCGC
CTGTGGCTGG TCACGGTCAA GTAG
|
|---|
| Protein sequence | MRISNLRIMA MLVISLAAAL PASAKTLAWT AGMDAVSMDP HSSNSTFTNA FVTNVYESLV
RFDDKLKIEP ALAESWKMTT PMVWRFNLRR GVKFHNGEAF GADDVVFTWA RVNSPGSLVR
GNLSDIKEVR KVDQYTVDIE TKTPFPTLLN ELVQLLVMSK SWSEANNATE ASDITQKKEN
FANRHTNGTG PFIMKSREVD IKTEFVANPN WWDKKLRHNL SDVAFMPIKS DATRTSSLLS
GVVDVSVDVP VQDVQRLQAG AAINLVQGPE LRTISLGMDH ARDELLYSDV KGKNPFKDLR
VRQAMYQAID VEALKRAVMR GASWPAATMI SPFLNGAPVS LNKRVLAYDP AAAKKLLADA
GYPNGFSVGM QCPNSRLVYS EQLCLAIGTM LSRVGIKVNL MIEPIAKWID RLNSTDLSLY
IMSHAGLPMA DAYAILKDVV GTHTATIGGL NAGRYSNPKF DEYLPKIASE LDTAKRNQLI
TEAVTIERND ISHIPLHQQP VIWAAKKGIE LHQSPDNQLR LWLVTVK
|
|---|
| |