| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0421 |
|---|
| Symbol | |
|---|
| ID | 4692857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 477717 |
|---|
| End bp | 478682 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639848202 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_995227 |
|---|
| Protein GI | 121607420 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.751263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0835793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGAT TTCTTGCACA GCGTCTTGCC AATGGCTTGG CGGTCATGTT GGTGGTGTCG
ATGGTTTCTT TTGCGATTTT CAACTTCATT GGCGACCCGG TGAATAACCT GGTGGGCGAG
ACCGCAACAC AGGCCGAAAA AGAAGCCTTG CGCGCCCGGC TCGGGCTGGA TGCGCCGCTG
CCGGTGCAAT ATCTGCTCTT TCTCGGGCGC GCGCTGCAAG GCGAGTTTGG CGTGTCGTAC
CGCAATCTGG AGCCGGTCTC GCGGGTCATC GCCAGCCGCA TCCCGGCCAC GCTGGAACTG
AGCCTGTGCG CGGCTTTGCT GGCACTCGGC CTGGGCCTGC CGCTGGGCAT TTACGCGGGT
ATCCGGCGCA AAGCCTGGGG TGCCCGCGCT TTGCAGGTGG TGTCGCTGAT CGGGATTTCG
GTGCCGTCCT TTCTGATCGG CATCGCGCTG ATTTTGCTGT TTTCCGTCGA ATTGCACTGG
TTGCCGTCGT TTGGCAGAGG GGAGGTGGTC AGTGTCGGTT TCTGGACCAC GGGCCTGTTG
ACTGCCAGTG GCTGGAAGTC GCTGGTCATG CCGACGATCA CGCTGTCCCT GTTCCAACTC
ACCCTGTTCA TGCGCTTGAC GCGCGCAGAA ATGCTGGAGG TGATGCGCAG CGATTACATC
AAGTTTGCGC GGGCACGCGG CATCCGCGAG CGCTCCATCC ATTTTCACCA CGCCTTGAAG
AACACCTTGA TTCCCATCAT TACCGTGGTC GGTTTGCAGC TTGGCTCGAT GATCGCGTTT
GCCATCATTA CCGAAACGGT ATTTCAATGG CCCGGCCTTG GCATGCTGAT CATCCAGGCG
ATTACCTTTA GCGACGTGCC GCTGATTGCC GCCTATCTGA TGTTGATTGC GCTGATGTTC
GTGCTGATCA ATATGGTCGC CGACCTGCTT TACTTTCTGG TCGACCCGCG CTTGCGTGTC
TCCTGA
|
|---|
| Protein sequence | MLRFLAQRLA NGLAVMLVVS MVSFAIFNFI GDPVNNLVGE TATQAEKEAL RARLGLDAPL
PVQYLLFLGR ALQGEFGVSY RNLEPVSRVI ASRIPATLEL SLCAALLALG LGLPLGIYAG
IRRKAWGARA LQVVSLIGIS VPSFLIGIAL ILLFSVELHW LPSFGRGEVV SVGFWTTGLL
TASGWKSLVM PTITLSLFQL TLFMRLTRAE MLEVMRSDYI KFARARGIRE RSIHFHHALK
NTLIPIITVV GLQLGSMIAF AIITETVFQW PGLGMLIIQA ITFSDVPLIA AYLMLIALMF
VLINMVADLL YFLVDPRLRV S
|
|---|
| |