| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0417 |
|---|
| Symbol | |
|---|
| ID | 4691577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 473184 |
|---|
| End bp | 474635 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639848198 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_995223 |
|---|
| Protein GI | 121607416 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0869717 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACT TACAGCAGAT CGATGTATTG ATCGAACATG GCTGCATCAT CACCATGGAT
GCGCAGCGCC GCGTGCTCGA CGATGGCGCG CTGGCCGTCC ACGGCCAGCG GATCGTCGCC
GTCGGCGCCA CGGACGCATT GCGGCAGCGC TACCAGGCCG CGCGCGTGCT CGATGCGCGC
CGCAAGGCGG TATTGCCGGG CTTGATCGAT GCGCATGCGC ACGCCGGCCA CGCGATGCTC
AAGACCATGG GCGGCGGCAA CGGCGAGGCC TGGATGCATG CCTGCAAAAC CATTTACACC
AGCGCCTCCG ACGAAAATTT TTGGGAAGTC GAATCGCATC TGGCCGCGCT GGAGCGCTTG
AAAGCCGGCG TGACCACGGG CGTGTCGCTG CTGGGCGGGG GCGACTCCAT CATGCGCGTG
GACGACCCCG TGTATGCGCA GCGCCACTGC GCGGCGGTGG CCAAAACCGG CACCCGCTCC
GTGGTGGCCG TCGGCCCGTC GCGCCCGCCG GCGCCGCGCA ACTACACCAC TTATGCAGCC
CATGGCGCGA CCGTGCGGGC GGTCGATTTC GACACCATGT ATGCGGTCTG CCAAGCCATC
ATCGACGCAT GCCACGACAG CGCAGACCAG CGCATCAAGA TCGCGCTGAC ATTGCCGGTG
TATGGCCCGG CCTTCGACCC TGAACTCGCC GCCTTCGAAG CCATCTATCG CAGCCAGGCC
GGGCAATACA TGGCGCTGGC GCGTGCACGC GGGCTGACCT TCACGCAGGA CGGCCATCGC
GCCGGCACCC TCGCATTTGC CCACCGGGAA CTGGGTTTGC TGGGTCGCGC ATCGTTCATG
TCGCATGCCA TCGACCTGAC CGGGGAAGAC ATTGCCCTGT GCCGCGAAAC CGGCACTTCC
ATCGTGCACA ACCCCAGCGC CATCATGTCG ATTCGCGGGC GCTGCCCGGT GCCGGAACTG
ATCGACGCCG GCGTCAACGT GGCCATCGGC TCCGACGGCG CAGCGCCCGA TCGCGGCTAT
GACATGTTCC GCCACATGTC GCAGTGCATG CACTACCACC GGCGCCACTT CCGCGATGCC
GGCGTATTGC CGCATGGCAA AGTGCTGGAA ATGGTGACCA TCGATGCGGC CCGGGCGCTA
TCGATGGAGC AGGACATCGG CTCGCTCGAA GCCGGCAAGA AAGCCGACAT CATTCTGGTC
GATCTGTTCA AGCCGCACCT GATGCCGCTG AACATGCCGG TCTACCGCAT CACCTGCTTT
GCCAATGCCG GCGACGTCTG CACCACCATC GTCGATGGCA ACATCCTGAT GGAAGATTAC
CGCGTGCTGT CCGTCGATGA AACCGAAGTG CTGGAGCGCG TCACGATCGA GGCCGAACGC
ATGCTGGAGC GCAGCGGCCT GCGCCATCTG CTCGACGCGC CGCCCCGGCT CTGGGGGGCG
AGCCATTATT GA
|
|---|
| Protein sequence | MQNLQQIDVL IEHGCIITMD AQRRVLDDGA LAVHGQRIVA VGATDALRQR YQAARVLDAR
RKAVLPGLID AHAHAGHAML KTMGGGNGEA WMHACKTIYT SASDENFWEV ESHLAALERL
KAGVTTGVSL LGGGDSIMRV DDPVYAQRHC AAVAKTGTRS VVAVGPSRPP APRNYTTYAA
HGATVRAVDF DTMYAVCQAI IDACHDSADQ RIKIALTLPV YGPAFDPELA AFEAIYRSQA
GQYMALARAR GLTFTQDGHR AGTLAFAHRE LGLLGRASFM SHAIDLTGED IALCRETGTS
IVHNPSAIMS IRGRCPVPEL IDAGVNVAIG SDGAAPDRGY DMFRHMSQCM HYHRRHFRDA
GVLPHGKVLE MVTIDAARAL SMEQDIGSLE AGKKADIILV DLFKPHLMPL NMPVYRITCF
ANAGDVCTTI VDGNILMEDY RVLSVDETEV LERVTIEAER MLERSGLRHL LDAPPRLWGA
SHY
|
|---|
| |