Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0411 |
Symbol | |
ID | 4691256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 465414 |
End bp | 466244 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639848192 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_995217 |
Protein GI | 121607410 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.499589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAT TTGGCAAAAC CGTGGCCGCC AGCGCTGTCG GCGGCGGCCT GATCGTCGTG GCGCTGGCGG GCCTGGTCTT GCTGGCGCCG CTGGTGGCAC CGCATGGCGA GACCGAAACC GTTGGCGATA TCTGGCTGCT GCCGGGCGCG GAGCATCTGC TTGGCACCGA CAGCATCGGG CGCGACATGC TTTCGCGGCT GTTATACGGC GGGCGCACTA CGCTTGGCAT CGCGCTTGCA GTCAGTTTGC TCTCCTTTTC CCTGGGCATC GTCAGCGGCT TTGCCGCCGT GGTGCTCGGA CGCTACGTCG ATCTGCTGCT CTCGCGTCTG GTCGATACGT TGATGGCGAT TCCGGTGCTG ATCTTCGCGC TGATGATTCT CTCGGTGCTT GGCACCTCGG TGCCGGTGTT GATCTGCACC ATCGCCGTGC TGGACGCCAC GCGGGTGTTC CGGCTGGCGC GGCTGGTGGC GCAAGGCATC ATGGTGCAAG AGTATGTGGA AGCGGCGCGG CTGCGTGGCG AAGGGTTGGG CTGGATTATC CGGCGCGAGA TTTTGCCCAA CGCGGTGCCG GCCTTGCTGG CGGAATTCGG CATGCGCTTT GGCTTCACCA TCCTGTTCGT CGCCGGCCTG AGTTTTCTCG GCCTGGGCAT TCAGCCGCCG TATGCAGACT GGGGCGGCAT GGTGCGTGAC AACGCGCAGG CGATCAATTT CGGCGGTATC GCGCCACTCT TTCCGGCGCT GGCAATTGCG CTGTTGACGA TAGGCATCAA CCTCGTGGTG GATTGGCTGC TGTCCGTGCG GGCACAGGGG CAGGCGGGGT CGATGGCATG A
|
Protein sequence | MKIFGKTVAA SAVGGGLIVV ALAGLVLLAP LVAPHGETET VGDIWLLPGA EHLLGTDSIG RDMLSRLLYG GRTTLGIALA VSLLSFSLGI VSGFAAVVLG RYVDLLLSRL VDTLMAIPVL IFALMILSVL GTSVPVLICT IAVLDATRVF RLARLVAQGI MVQEYVEAAR LRGEGLGWII RREILPNAVP ALLAEFGMRF GFTILFVAGL SFLGLGIQPP YADWGGMVRD NAQAINFGGI APLFPALAIA LLTIGINLVV DWLLSVRAQG QAGSMA
|
| |