| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0410 |
|---|
| Symbol | |
|---|
| ID | 4690388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 464459 |
|---|
| End bp | 465406 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639848191 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_995216 |
|---|
| Protein GI | 121607409 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.506454 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGGC TGTTGATGCA GAGGGTGCTG CTGGGCTTGC TGACCTTGTG GCTGGTGTCG
GTGCTGATTT TCGTCGGCAC CGAGATGCTG CCCGGCGATG TTGCCTCGGC CATTCTCGGC
CAGTCCGCCA CGCCTGAAAC GGTGGCGGCG TTGCGCGCTT CGCTCGGCCT CGATCAGCCA
GCGCTGCAAC GTTACCTGAT GTGGTTGCTG CATTTCCTGC AAGGCGATTT GGGCACTTCG
CTCACCAATG GCCGCTCGAT TGCCGCAGAC CTGATGCCGC GCCTTTACAA CACGCTGTTT
CTGGCCAGCT ATGCGGCGCT GGTGGTGATA CCGCTGTCGA TACTGCTGGG CATTGCGTCG
GCGATTTGGC AAAACAGCCT GTTTGATCGG GCCGCCAGTG TGCTATCGCT TGCCAGTATC
TCGATGCCGG AGTTTTTCGT CGGTTATGTC CTGATCATCC TGCTGGCGGT GAAGTGGGCG
CTGCTGCCCA GTCTGGCGGT GGTCTCGGAC AGCATGTCCT GGAGTGAACG GCTGTACGCG
ACAACGCTGC CCATGCTCAC CTTGCTGTTC GTCGTCACTG CGCACATGTT GCGCATGACG
CGCGCATCGG TCATCGCGGT GATGGGCAGC GCCTATATCG AGATGGCCAT TCTCAAGGGG
CTCCCCAAGT GGCGCATCGT GGTGCAACAT GCCTTGCCCA ATGCGCTTGC GCCCATTATC
AATGCCGTGT CGTTCAACCT GGCTTACCTG GTCGTTGGCG TCATCATGGT CGAGGTGGTG
TTTGTCTATC CCGGCGTGGG GCAGTTGATG GTCGATGCGG TATCGAAACG CGATTTGCCG
GTGGTGCAGG CATGCGGCTT GTTGTTCGCT GCTGCCTACA TCGGTTTGAA CACGCTTGCC
GATGTGCTGG CGGTCTGGGT CAATCCGCGT TTGCGGCAGG CGAGATGA
|
|---|
| Protein sequence | MRRLLMQRVL LGLLTLWLVS VLIFVGTEML PGDVASAILG QSATPETVAA LRASLGLDQP
ALQRYLMWLL HFLQGDLGTS LTNGRSIAAD LMPRLYNTLF LASYAALVVI PLSILLGIAS
AIWQNSLFDR AASVLSLASI SMPEFFVGYV LIILLAVKWA LLPSLAVVSD SMSWSERLYA
TTLPMLTLLF VVTAHMLRMT RASVIAVMGS AYIEMAILKG LPKWRIVVQH ALPNALAPII
NAVSFNLAYL VVGVIMVEVV FVYPGVGQLM VDAVSKRDLP VVQACGLLFA AAYIGLNTLA
DVLAVWVNPR LRQAR
|
|---|
| |