| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0370 |
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| Symbol | |
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| ID | 4691617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 417926 |
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| End bp | 420871 |
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| Gene Length | 2946 bp |
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| Protein Length | 981 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639848153 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_995178 |
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| Protein GI | 121607371 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.687258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGTAT CCACCCCTTC CCTTCGCCCC CTCACGGCCT TTGTGGGGGT GTTCGCGCTG
GCTGCGGCCT GCGCAGGGGT CTTGATCTGG ACGTTGGAGA GCCAGGACCG CGCCGAGCAG
CGCAGCCAGG CGGCCGACAT GGCGGGCGAC CATGTGCAGG CGCTGCAACG CGCGATAGAG
CTGGCGCTGT CGGCCAATAA CGCATTGGTG GCACTGGTGC GCCAGGGGCG GGGCAGCGTG
CCCCAGTTCG AGGAAATCGG CACGCAGATG CTGCCGTTTT ATCCCGGCAT TGCCGCCATG
GGACTGTCTC CGTCAGGGGT GGTGCGGCAG GTGGTGCCGC GCCAGGGCAA TGAGGGTGCG
ATGGACTTCG ACATGCTGCA CGACCCGCAG CAAGGCACGG AATCGGCGCA CGCGCGCGCG
TCGGGCCGGC TCACGCTGGC CGGCCCCATG GAGCTTGCCC AAGGGGGGCT GGGGGTGGTG
GGACGCCAGC CGGTTTATCT GGACGATGAG CAGGGGCAGC GCAGCTTTTG GGGCTTCACC
TATGTCGCCA TCCGGTTGCC GGATGTGCTG GCGGCTGCCA GGCTGGACCA ACTCACCGCA
CGGGGTTATC GCTACCGCCT GTGGCGCGTC CGGCCCGACA ACGGCCAGGA GCAGACCATT
GCCGCCTCCG CGCCCCCTGC CGGTGCCGGC GCGATGAGCC GCTCACTGGC CTTGCCCAAC
GGGCAGTGGA CGCTGGGCCT GACCCCGGCG CAAGGATGGG GTGCGGCGGG CGTGCTGGCG
CTGCGCTGCG CCTTGGGCCT GCTGTTTGCG CTGCTGATGG CCTATCTGGC GCGCCTGCTG
TTCGCGTTGA AGGCGCATGA GCGCGGGCTG GCCGACCAGG TGGCCCAGCG CATCTCGGAG
ATACAGGCCA CGCAGCAGCA ACTGCGCGCC ACCATCGACG CCATTCCCGA TCCGCTGTTC
GAAATCGACC AGGATGGCCG CTATTGCAGC GTGCACAGCC AGCGCGCCGA GTTGTTGATG
GGGCCGGCCG AGCAACTGAT CGGCCGCAAC GTCACCGAGG TGCTGCCCAC GCTGGCAGCG
CTGTCGGTGC TGGATGTGTT GCATGAAGCC CAGGCGCAGG GCTGGTCCGT GGGGCGGCAG
ATCATGCTGG ACTTGCCGGA TCTGGGACCC ACCTGGTTCG AGCTGTCCGC AGCGCGCAAG
CCGCAAGCCG CCGGGGCCAA GCCGCGCATC ATCTTGCTGT CGCGCGACAT CACCGAGCGC
AAGCGCTCGC AGGAGCAGTT GCAACTGACC GCCCAGGTGT TCGATCAGAG CAGCGAAGCC
ATCGTGATTG CCGATGCGAG CCACCGCATC GTGCGCATCA ACCGGGCGTT CAGCCGCATC
ACCGGGTACC AGGAATCCGA GGCCGTCGGG CAGTCGGTGC GCCTGCTGAC CATGGCCGAG
GCGGGCCCTG ATTGCAATGC CGATGCCGTG TACGCCCGGC TGGCCCGGCA GGAGCGCTGG
GAGGGCGAGA GTTGGGGGCG GCGCAAGGAC GGCTCCGGCT ATCCGCAGTG GCTGTCGGTC
AGCAGCGTGC GCGATGGCGA CGCGAACGGG CCCATCACCC ATTCGATCAC CTTGTTTCGC
GACATCAGCT TGCAGCGCGA AGCGCAGGAG CGGATACAGC GCCTGGCGCA TTTCGACCCG
CTGACCGACC TGCCCAACCG CGTGCTGCTG GCCGAGCGCA CCCAGCGGCA GATTGCGCAG
GAGCAGGCCC GTGGCGGCCA GTTGGCGCTG CTGTTCCTGG ACCTGGACCA CTTCAAGAAC
GTCAACGACT CGCTGGGCCA CCGCATTGGC GACATCCTGC TGGTGGCGGT GGCGCGGCGG
CTGCAATCCC TGATCGGCCC GCAGGACACC GTCTCGCGCC TGGGCGGCGA CGAGTTTTTG
CTGCTGCTGC CGGCCACCTC GGCGGCCCAT GCGGCCAAGG TCGCCAGCGC TTTGCTGACC
GCCGTGGCCC AGCCTTTTCA GATCGACCCT TACGAGCTCA GCACCACGCT GTCGGTGGGC
ATTGCGATGT GTCCGGCCGA TGGCGAGTCG TTCGACACGC TGTACCAGCG CGCAGATGCC
GCCATGTACA GCGCCAAGCA AAGCGGGCGC AACCGCTATG GTTTCTTCAC CGCCGACCTG
CAAGCGCGCA CCGCGCGCGC GCTGCAGATC GAAAATGCGC TGCGCCGCGC GCTGGAACGC
CAGCAGTTCG AATTGCACTA CCAGCCCCAG GTCTCGCTCG GCACGGGCCA GGTCGTCGGC
GCCGAGGCGC TGCTGCGCTG GCACCACCCG GAGTTGGGCG TGGTCGCGCC GGCCGAGTTC
ATTCCGGTGG CGGAGAACAG CGGCCAGATC GTGGCGCTGG GCGAATGGGT GCTGCACACC
GCCGCGCGCG ATGCCAAGCG CTGGCTGGAC ATGCAACTGC CTTTGCGGGC GGTATCGGTG
AACCTCTCGG CGGTGCAGTT TCGCCACCCG CAGTTGCCCG AGATGGTCAC GCGCTGCCTG
CAGCAGGCCG GGCTGCCTGC GCGCCGCCTG GAACTGGAAC TGACCGAAGG CGCCGCCGTC
GACGATCCGG TGGCGGCGCT GGCCATGATG GACCAACTGC ACGACCGGGG CGTGCGCCTG
TCGATGGACG ACTTTGGCAC CGGGTACTCG TCGCTCAGTT GCCTGAAACG CTTTCAGATC
TACAAACTGA AGATCGACCA ATCGTTCGTG CGCGATCTCG ACGACGACGC CAACGACCGG
GCCATCGTCA GCGCCATCAT CCGCATGGCG CAGGCGCTGG GCATGCAAAC CACCGCCGAA
GGGGTGGAGA CCGACGGCCA ACTCCAATTC CTGCGCGCCC AGGGCTGCGA CGAAGGCCAG
GGCTACCTGT TCAGCCGCCC CCTGCCGGCC GATGCGTTCG AGGCCTATTT GCGGGCGATG
AAATGA
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| Protein sequence | MPVSTPSLRP LTAFVGVFAL AAACAGVLIW TLESQDRAEQ RSQAADMAGD HVQALQRAIE
LALSANNALV ALVRQGRGSV PQFEEIGTQM LPFYPGIAAM GLSPSGVVRQ VVPRQGNEGA
MDFDMLHDPQ QGTESAHARA SGRLTLAGPM ELAQGGLGVV GRQPVYLDDE QGQRSFWGFT
YVAIRLPDVL AAARLDQLTA RGYRYRLWRV RPDNGQEQTI AASAPPAGAG AMSRSLALPN
GQWTLGLTPA QGWGAAGVLA LRCALGLLFA LLMAYLARLL FALKAHERGL ADQVAQRISE
IQATQQQLRA TIDAIPDPLF EIDQDGRYCS VHSQRAELLM GPAEQLIGRN VTEVLPTLAA
LSVLDVLHEA QAQGWSVGRQ IMLDLPDLGP TWFELSAARK PQAAGAKPRI ILLSRDITER
KRSQEQLQLT AQVFDQSSEA IVIADASHRI VRINRAFSRI TGYQESEAVG QSVRLLTMAE
AGPDCNADAV YARLARQERW EGESWGRRKD GSGYPQWLSV SSVRDGDANG PITHSITLFR
DISLQREAQE RIQRLAHFDP LTDLPNRVLL AERTQRQIAQ EQARGGQLAL LFLDLDHFKN
VNDSLGHRIG DILLVAVARR LQSLIGPQDT VSRLGGDEFL LLLPATSAAH AAKVASALLT
AVAQPFQIDP YELSTTLSVG IAMCPADGES FDTLYQRADA AMYSAKQSGR NRYGFFTADL
QARTARALQI ENALRRALER QQFELHYQPQ VSLGTGQVVG AEALLRWHHP ELGVVAPAEF
IPVAENSGQI VALGEWVLHT AARDAKRWLD MQLPLRAVSV NLSAVQFRHP QLPEMVTRCL
QQAGLPARRL ELELTEGAAV DDPVAALAMM DQLHDRGVRL SMDDFGTGYS SLSCLKRFQI
YKLKIDQSFV RDLDDDANDR AIVSAIIRMA QALGMQTTAE GVETDGQLQF LRAQGCDEGQ
GYLFSRPLPA DAFEAYLRAM K
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