| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0352 |
|---|
| Symbol | |
|---|
| ID | 4693684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 399810 |
|---|
| End bp | 400541 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639848135 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_995160 |
|---|
| Protein GI | 121607353 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.97784 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATG ACACCGTGCT CGAAGCCCAG GATGTCGTGA TGCGCTTTGG CGGCGTCACG
GCAGTCGATG GCGCATCCAT GAAACTCAAA CGCAATGAAT TGCGCTGCCT GATCGGTCCC
AATGGGGCGG GTAAATCGAC CTTCTTCAAA TGCCTCAGCG GTCAACTGGT GCCGACCGAA
GGCGACATCA TCCTGAACGG CGAACATGTC GCAGGCCGCC TGGTGCATGA GATTGCGCGC
ATGGGGGTGG CGCTCAAAAC CCAGGTTCCC AGTTTGATGA ATGGCCTGAG CGTCCATGAA
AACCTGTGGC TGGCGGCGCT GGCCCGCCAC TCACGCGCCG ATGCCAATGC CCAGGTGGAG
CGCCTGATCG GCGAACTGGG CCTGGCAGCC CATGCGCGCA GCCTGGCCGG CGCGTTGGCG
CATGGTCAAC GGCAGATGGT GGAACTGGGT GTCGTGCTCG CCACCGAGCC ATGGCTGGTA
CTGCTGGACG AGCCTGCGGG CGGCCTCACC CGTGACGAGG TGGAGCGCAT GGCAGAGATC
GTCAAGAACC TGGCCATGCG CGCCACGGTG GTCGTGGTCG AACATGACAT GAACTTTGTG
CGTGCCATCG CCGAAACCGT GACCGTGTTC CACCATGGCC GCATCCTGGC GCAGGGCAAC
GCCGAAACCG TTCTGTCGGA TGAGCGGGTG CGCGCCGTGT ACCTGGGCAA ACAGCACGGA
ACGCCGGCAT GA
|
|---|
| Protein sequence | MKHDTVLEAQ DVVMRFGGVT AVDGASMKLK RNELRCLIGP NGAGKSTFFK CLSGQLVPTE
GDIILNGEHV AGRLVHEIAR MGVALKTQVP SLMNGLSVHE NLWLAALARH SRADANAQVE
RLIGELGLAA HARSLAGALA HGQRQMVELG VVLATEPWLV LLDEPAGGLT RDEVERMAEI
VKNLAMRATV VVVEHDMNFV RAIAETVTVF HHGRILAQGN AETVLSDERV RAVYLGKQHG
TPA
|
|---|
| |