Gene Veis_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0349 
Symbol 
ID4691555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp396560 
End bp397783 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content59% 
IMG OID639848132 
Productextracellular ligand-binding receptor 
Protein accessionYP_995157 
Protein GI121607350 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR03669] urea ABC transporter, substrate-binding protein, archaeal type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTA CCCGCAGAAG CGTCTCGATC CGGTTCGCAG GTCTTGCCGC CGCGCTTGCA 
TTGCCTCGAT GGGCGCATGC AGCCGACCCC ATCAAGTTCG GCAGTTTGCT GGATACCTCG
GGCAACTTCG ATGCCTACGG CAAGCCCATG AATATGGCCA CCGACCTTGC CATCGACGAG
ATCAACCGCA GCGGTGGCTT GATCGGCCGG CAGATCAAAA AGAGTGCTTA CGACACCCAG
TCCAACATGG CGATGTACAC CAAGTTCGCG CAGCAACTGG CAAGGCAGGA CAAGGTGGAT
GTGGTGATTG GCGGCATCTT GTCCGCCTCG CGCGAGGCCA TTCGTCCTTT GCTGAACCGC
GAGAAGATTT TGTATGTCTA CACCCCTTTG TATGAAGGCG GTGTTTGCGA TGGCAATACT
TTTCTGACCG GAACCACGCC CGCGCAGCAG GCTGAAGTGC TGGTTCCCTA TGCCGTCAAG
AAATGGGGCA GGAAGGCTTA CATCCTGGCT GCCGACTACA ACTACGGCCA ATACATGGCC
AAGTGGTTCC AGAAGTTCTT GGCGGAAAGC GGCGCTGCCG ATGTCGGCCT TGAGTTCTTC
CCGCTGGATG TGTCGGATTT CAATTCGACC ATCGCCAAGA TTCAGGCAGC CAAGCCTGAT
TTCGTGATCA GCGCGCTGGT CGGCGGCGCA CACCTGTCCT TCTACCGGCA ATGGGCGGCA
GCCGGGATGA AGGGCAAGAT TCCGCTGGTC TCCACCACGC TCGGCGTCGG CAATGAGCAT
CAGGTGCTGA CGGCCGCAGA AGGTGACGGC ATTCTGGTGG CTTACAACTA CTCCCCGGAG
TTGCAAACAC CCGCCAACAA GGTGTTTCTG CAAGCCTGGG GGAAGATGCA TGGCGGCAAC
ACCAAGGCCA TCAATGAGTT GGCGGTCTTG CACTACCAGG GCATCAAGCT GTGGGCAGAA
GGCGTCAGGA AGGCCGGCAG TCTGGAGCGC GCCAAAGTCA TCGGCGCCAT GGCCTCCGGG
ATTTCGATCG ATGGCCCCTC GGGCAAAGTC AGCATCGACG GCCCAACCCA CCATGTGACG
CTGGATGTGC ATGTGATGGA AATACGCGGG CAGCAGTTGA AGGTATTGCA GAGCTTCGCC
CAGCGGCCTC CGCGGGAAAC CCAGGCGGTC TGCAATCTGG TCAAGACGCC GGCATCGAGC
ACGCAGTTTG AAATCAAGCT CTGA
 
Protein sequence
MKATRRSVSI RFAGLAAALA LPRWAHAADP IKFGSLLDTS GNFDAYGKPM NMATDLAIDE 
INRSGGLIGR QIKKSAYDTQ SNMAMYTKFA QQLARQDKVD VVIGGILSAS REAIRPLLNR
EKILYVYTPL YEGGVCDGNT FLTGTTPAQQ AEVLVPYAVK KWGRKAYILA ADYNYGQYMA
KWFQKFLAES GAADVGLEFF PLDVSDFNST IAKIQAAKPD FVISALVGGA HLSFYRQWAA
AGMKGKIPLV STTLGVGNEH QVLTAAEGDG ILVAYNYSPE LQTPANKVFL QAWGKMHGGN
TKAINELAVL HYQGIKLWAE GVRKAGSLER AKVIGAMASG ISIDGPSGKV SIDGPTHHVT
LDVHVMEIRG QQLKVLQSFA QRPPRETQAV CNLVKTPASS TQFEIKL