Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0349 |
Symbol | |
ID | 4691555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 396560 |
End bp | 397783 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639848132 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_995157 |
Protein GI | 121607350 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03669] urea ABC transporter, substrate-binding protein, archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTA CCCGCAGAAG CGTCTCGATC CGGTTCGCAG GTCTTGCCGC CGCGCTTGCA TTGCCTCGAT GGGCGCATGC AGCCGACCCC ATCAAGTTCG GCAGTTTGCT GGATACCTCG GGCAACTTCG ATGCCTACGG CAAGCCCATG AATATGGCCA CCGACCTTGC CATCGACGAG ATCAACCGCA GCGGTGGCTT GATCGGCCGG CAGATCAAAA AGAGTGCTTA CGACACCCAG TCCAACATGG CGATGTACAC CAAGTTCGCG CAGCAACTGG CAAGGCAGGA CAAGGTGGAT GTGGTGATTG GCGGCATCTT GTCCGCCTCG CGCGAGGCCA TTCGTCCTTT GCTGAACCGC GAGAAGATTT TGTATGTCTA CACCCCTTTG TATGAAGGCG GTGTTTGCGA TGGCAATACT TTTCTGACCG GAACCACGCC CGCGCAGCAG GCTGAAGTGC TGGTTCCCTA TGCCGTCAAG AAATGGGGCA GGAAGGCTTA CATCCTGGCT GCCGACTACA ACTACGGCCA ATACATGGCC AAGTGGTTCC AGAAGTTCTT GGCGGAAAGC GGCGCTGCCG ATGTCGGCCT TGAGTTCTTC CCGCTGGATG TGTCGGATTT CAATTCGACC ATCGCCAAGA TTCAGGCAGC CAAGCCTGAT TTCGTGATCA GCGCGCTGGT CGGCGGCGCA CACCTGTCCT TCTACCGGCA ATGGGCGGCA GCCGGGATGA AGGGCAAGAT TCCGCTGGTC TCCACCACGC TCGGCGTCGG CAATGAGCAT CAGGTGCTGA CGGCCGCAGA AGGTGACGGC ATTCTGGTGG CTTACAACTA CTCCCCGGAG TTGCAAACAC CCGCCAACAA GGTGTTTCTG CAAGCCTGGG GGAAGATGCA TGGCGGCAAC ACCAAGGCCA TCAATGAGTT GGCGGTCTTG CACTACCAGG GCATCAAGCT GTGGGCAGAA GGCGTCAGGA AGGCCGGCAG TCTGGAGCGC GCCAAAGTCA TCGGCGCCAT GGCCTCCGGG ATTTCGATCG ATGGCCCCTC GGGCAAAGTC AGCATCGACG GCCCAACCCA CCATGTGACG CTGGATGTGC ATGTGATGGA AATACGCGGG CAGCAGTTGA AGGTATTGCA GAGCTTCGCC CAGCGGCCTC CGCGGGAAAC CCAGGCGGTC TGCAATCTGG TCAAGACGCC GGCATCGAGC ACGCAGTTTG AAATCAAGCT CTGA
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Protein sequence | MKATRRSVSI RFAGLAAALA LPRWAHAADP IKFGSLLDTS GNFDAYGKPM NMATDLAIDE INRSGGLIGR QIKKSAYDTQ SNMAMYTKFA QQLARQDKVD VVIGGILSAS REAIRPLLNR EKILYVYTPL YEGGVCDGNT FLTGTTPAQQ AEVLVPYAVK KWGRKAYILA ADYNYGQYMA KWFQKFLAES GAADVGLEFF PLDVSDFNST IAKIQAAKPD FVISALVGGA HLSFYRQWAA AGMKGKIPLV STTLGVGNEH QVLTAAEGDG ILVAYNYSPE LQTPANKVFL QAWGKMHGGN TKAINELAVL HYQGIKLWAE GVRKAGSLER AKVIGAMASG ISIDGPSGKV SIDGPTHHVT LDVHVMEIRG QQLKVLQSFA QRPPRETQAV CNLVKTPASS TQFEIKL
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